isglobal-brge / SNPassocLinks
Genetic association studies
☆16Updated last year
Alternatives and similar repositories for SNPassoc
Users that are interested in SNPassoc are comparing it to the libraries listed below
Sorting:
- An R package for generating comparative regional association plots☆18Updated last month
- Easy-to-use R wrappers for the eQTL Catalogue's API (both with tabix and the REST API).☆14Updated 2 years ago
- A rapido and lightweight method for PGS computation☆14Updated 8 months ago
- R package enabling statistical association analysis and using immunogenetic data transformation functions for HLA amino acid fine mapping…☆14Updated last year
- Sample code for ldsc analyses in UKBB☆31Updated 2 years ago
- Create LocusZoom-style plots in R.☆22Updated 2 years ago
- Primo☆16Updated 4 years ago
- Regional association plots☆26Updated last year
- metaUSAT is a data-adaptive statistical approach for testing genetic associations of multiple traits from single/multiple studies using u…☆20Updated 4 years ago
- LASSO for GWAS with summary statistics☆78Updated 5 years ago
- Tissue of ACTion scores for Investigating Complex trait-Associated Loci☆13Updated 4 years ago
- Various multi-trait association tests in R☆11Updated 7 years ago
- Get SNP proxies from the 1000 Genomes Project.☆30Updated 7 years ago
- ☆10Updated 2 years ago
- Benchmarking gene and variant prioritization algorithms for GWAS data☆15Updated 5 years ago
- Core utilities for single-cell RNA-seq☆12Updated 6 months ago
- Genetics ToolboX R package☆32Updated 5 years ago
- DENTIST (Detecting Errors iN analyses of summary staTISTics) is a QC tool for summary-data-based analyses.☆26Updated 2 years ago
- Toolkit for QTL mapping and meta-analysis.☆17Updated 3 years ago
- GWAS gold standards repository☆39Updated last year
- A toolkit developed by JhuangLab members to facilitate the analysis of next-generation sequencing (NGS) data.☆19Updated 6 years ago
- genetic correlation between phenotypes in the UK biobank☆13Updated last year
- An R package for multivariate adaptive shrinkage.☆92Updated last year
- LDlinkR☆61Updated last year
- VarGen is an R package designed to get a list of variants related to a disease. It just need an OMIM morbid ID as input and optionally a…☆17Updated last year
- Basic and fast GWAS functions for QQ and Manhattan plots (incl. gene names)☆32Updated 5 months ago
- Code and data related to the meta-analysis of fat distribution in UK Biobank and GIANT☆22Updated 6 years ago
- Query sequence data (VCF/BCF1/BCF2, Tabix, BGEN, PLINK) in R☆32Updated last month
- Scripts used for generating Neale Lab UKB results☆20Updated 3 years ago
- Calculate AUC based on GWAS summary statistics only☆10Updated 7 years ago