Jhsmit / PymageJLinks
Python tools for ImageJ
☆13Updated 3 years ago
Alternatives and similar repositories for PymageJ
Users that are interested in PymageJ are comparing it to the libraries listed below
Sorting:
- Python based viewer for large mulit-dimensional datasets.☆20Updated 5 years ago
- Connecting Java/ImgLib2 + Python/NumPy☆30Updated 2 months ago
- jupyter notebook extension to visualize numpy arrays with the neuroglancer☆27Updated 6 years ago
- Deprecated: Read and write image data from and to TIFF files.☆62Updated 6 years ago
- Prototype implementation of napari-integrated CNN training viewer☆14Updated 6 months ago
- Discover, install, and share napari plugins☆52Updated last month
- The RPC library used in ImJoy.☆24Updated 11 months ago
- Running ImJoy plugins in Jupyter notebooks☆11Updated 2 years ago
- Notebooks for VoidSeg☆16Updated 5 years ago
- website for the napari image viewer☆44Updated last week
- A python script editor plugin for napari☆11Updated 2 years ago
- sample images, examples, and speed tests for trackpy☆21Updated last week
- Friendlier matplotlib interaction with large images☆16Updated 2 years ago
- Generate multifunctional and macro recordable GUIs from Python classes☆44Updated this week
- python bindings to the ClearVolume project that enables serving numpy data from within python to the renderer.☆15Updated 8 years ago
- pyHPC workshop☆11Updated 3 years ago
- A fast and cross-platform image analysis framework for fluorescence time-lapse microscopy and bioimage informatics.☆44Updated last year
- ipywidgets GUI elements for HyperSpy☆11Updated last month
- Quickly find the affine matrix mapping one image to another using manual correspondence points annotation☆21Updated 3 months ago
- Linear and non-linear image registration methods, using scipy and numpy.☆63Updated 12 years ago
- ☆12Updated 11 months ago
- Jupyter notebooks from our OMERO Plus for High Content Screening & Analysis webinar☆13Updated last year
- ☆12Updated 4 years ago
- General-purpouse camera capture plugin for data streaming to napari☆25Updated last year
- Automatic segmentation of electron microscopy volumes☆77Updated 4 years ago
- TensorFlow Deconvolution for Microscopy Data☆90Updated 3 years ago
- Accelerating Single Molecule Localization Microscopy with Deep Learning☆52Updated 2 years ago
- Fast writing of numpy 3d-arrays into HDF5 Fiji/BigDataViewer files.☆35Updated 10 months ago
- a free, open-source web app for annotating, training, and evaluating image understanding algorithms☆25Updated 3 years ago
- Easily read and write ome-tiff images in python☆27Updated last year