icemansina / IJCAI2016
This repository is for the replication of our published paper "Protein Secondary Structure Prediction Using Cascaded Convolutional and Recurrent Neural Networks" on IJCAI2016. Please consult and consider citing the following papers:
☆14Updated 7 years ago
Alternatives and similar repositories for IJCAI2016:
Users that are interested in IJCAI2016 are comparing it to the libraries listed below
- Implementation of IJCAI15 cascade cnn and LSTM for protein secondary structure prediction☆38Updated 7 years ago
- Improving protein function prediction with synthetic feature samples created by generative adversarial networks☆22Updated 4 years ago
- PyTorch implementations of protein secondary structure prediction on CB513.☆16Updated 6 years ago
- Python/TF1 implementation of DeepAccNet (https://www.biorxiv.org/content/10.1101/2020.07.17.209643v1)☆10Updated 4 years ago
- Recurrent Geometric Network in Pytorch☆29Updated 4 years ago
- mGPfusion is a Gaussian process based method for predicting stability changes upon single and multiple mutations of proteins that comple…☆15Updated 6 years ago
- ☆29Updated 4 years ago
- Protein-ligand binding sites prediction toolkits☆21Updated 6 years ago
- Guided Conditional Wasserstein GAN for De Novo Protein Design☆37Updated 3 years ago
- Fast and easy contact prediction.☆36Updated 8 months ago
- Prediction of protein contact map☆20Updated 3 years ago
- ☆19Updated last year
- Paratope Prediction using Deep Learning☆59Updated last year
- Pseudo Likelihood Maximization for protein in Julia☆50Updated 3 weeks ago
- a python module for generating protein contact maps and distance maps☆46Updated 7 years ago
- Fully convolutional neural networks for protein residue-residue contact prediction☆44Updated 5 years ago
- DeepDom is an ab-initio method for protein domain boundary prediction☆15Updated 2 years ago
- Semantic Segmentor for Protein Structures.☆11Updated 3 years ago
- Protein secondary structure prediction use PSSM, HHBlits profiles and physio-chemical properties☆9Updated 5 years ago
- ☆26Updated last year
- ☆18Updated 5 years ago
- Rosetta FunFolDes – a general framework for the computational design of functional proteins.☆18Updated 5 years ago
- ☆7Updated 8 years ago
- DEFMap: Dynamics Extraction From cryo-em Map☆26Updated 2 years ago
- Variational autoencoder for protein sequences - add metal binding sites and generate sequences for novel topologies☆82Updated last year
- Computes a molecular graph for protein structures.☆58Updated this week
- A Python 3 version of the protein descriptor package propy☆39Updated last year
- Inner- and Outer Recursive Neural Networks for Chemoinformatics☆32Updated 3 years ago
- CapsNet for Protein Post-translational Modification site prediction.☆25Updated 5 years ago
- Long short-term memory recurrent neural networks for learning peptide and protein sequences to later design new, similar examples.☆72Updated last year