This repository is for the replication of our published paper "Protein Secondary Structure Prediction Using Cascaded Convolutional and Recurrent Neural Networks" on IJCAI2016. Please consult and consider citing the following papers:
☆13Nov 10, 2017Updated 8 years ago
Alternatives and similar repositories for IJCAI2016
Users that are interested in IJCAI2016 are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Implementation of IJCAI15 cascade cnn and LSTM for protein secondary structure prediction☆37May 21, 2017Updated 9 years ago
- Deep learning based alignment-free method for protein family modeling and prediction☆16Jul 31, 2018Updated 7 years ago
- Chromatin Accessibility Prediction via Convolutional Long Short-Term Memory Networks with k-mer Embedding☆15Nov 5, 2018Updated 7 years ago
- Chainer implementation of Graph Neural Networks for the Prediction of Substrate-Specific Organic Reaction Conditions☆11Apr 11, 2021Updated 5 years ago
- C++ Library for Electrostatics☆20Sep 19, 2025Updated 8 months ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Semantic Segmentor for Protein Structures.☆11Dec 20, 2021Updated 4 years ago
- 论文基于注意力机制的卷积神经网络模型 源代码☆16Aug 22, 2017Updated 8 years ago
- a universal machine learning model for predicting properties of Chemical Compounds☆11Sep 30, 2019Updated 6 years ago
- Secondary Protein Structure Prediction using Neural Networks and Deep Learning .☆10Jul 17, 2022Updated 3 years ago
- Review Paper: Deep Learning for Genomics: A Concise Overview☆13Mar 13, 2018Updated 8 years ago
- CB513 datasets for Protein Secondary Structure Prediction☆12Apr 3, 2025Updated last year
- ☆26Dec 8, 2022Updated 3 years ago
- Fast pairwise sequence alignment using SeqAn, in Python.☆13Mar 23, 2019Updated 7 years ago
- Implementation of Accurate Protein Structure Prediction by Embeddings and Deep Learning Representations☆23Feb 20, 2020Updated 6 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- ☆10Mar 29, 2023Updated 3 years ago
- Implementation of High Quality Protein Q8 Secondary Structure Prediction by Diverse Neural Network Architectures☆22May 9, 2019Updated 7 years ago
- Python bindings to ObjCryst++ Object-Oriented Crystallographic Library☆18Apr 6, 2026Updated 2 months ago
- Protein contacts prediction using deep learning models☆40Jan 16, 2019Updated 7 years ago
- Collection of tools for running MD, QM, and QM/MM calculations☆21Sep 27, 2025Updated 8 months ago
- Deep convolutional neural networks for protein contact map prediction☆23Aug 5, 2019Updated 6 years ago
- Deep Molecular Dreaming☆26May 25, 2024Updated 2 years ago
- QMCPACK Users Workshop 2019☆13May 24, 2019Updated 7 years ago
- Amino-Acid Sequence Annotation Predictor (ASAP)☆25May 13, 2020Updated 6 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Compare optimized geometries and energies from various force fields with respect to a QM reference.☆14Apr 19, 2021Updated 5 years ago
- Chainer implementation of Variational AutoEncoder (VAE) M1 / M2 / M1+M2☆24Aug 10, 2016Updated 9 years ago
- Benchmark data for density-functional theory method development.☆19May 22, 2026Updated 3 weeks ago
- Protein function prediction using a variational autoencoder☆95Mar 7, 2018Updated 8 years ago
- Assignments for Stanford CS224n (Winter 2017)☆13Jan 31, 2018Updated 8 years ago
- Set of scripts to automate the calculation of crystal lattice energies.☆14Oct 17, 2024Updated last year
- JAEGER is a deep generative approach for small-molecule design☆30Dec 21, 2021Updated 4 years ago
- libdlfind is a C-API and Python interface to the DL-FIND geometry optimization library☆24Apr 6, 2024Updated 2 years ago
- Computer aided proximal decaging as a universal strategy for temporal protein activation☆28May 26, 2025Updated last year
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Parse chinese address based on a lexicon of chinese place name☆14Nov 12, 2016Updated 9 years ago
- A Deep Learning Model for Protein Function Prediction☆18Jul 31, 2020Updated 5 years ago
- deepnn architecture for generating monophonic melodies conditioned on chords☆13Apr 15, 2019Updated 7 years ago
- Using Naive Bayes classification approach to identify the different species of Iris flowers.☆24Oct 31, 2019Updated 6 years ago
- Perform hyper-parameter tuning, training, testing and prediction with Keras☆44May 29, 2018Updated 8 years ago
- Keras implementation of Neural Graph Fingerprints as proposed by Duvenaud et al., 2015☆46Jan 25, 2019Updated 7 years ago
- Semi-supervised learning with mnist using variational autoencoders. An unsupervised representation is learned which allows for superior …☆34Mar 7, 2018Updated 8 years ago