This repository is for the replication of our published paper "Protein Secondary Structure Prediction Using Cascaded Convolutional and Recurrent Neural Networks" on IJCAI2016. Please consult and consider citing the following papers:
☆13Nov 10, 2017Updated 8 years ago
Alternatives and similar repositories for IJCAI2016
Users that are interested in IJCAI2016 are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- PyTorch implementations of protein secondary structure prediction on CB513.☆17Dec 30, 2018Updated 7 years ago
- 2020天池大赛，蛋白质结构预测大赛TOP1方案分享☆105May 21, 2020Updated 6 years ago
- Variational autoencoder implementation in tensorflow following the classic paper by Kingma and Welling.☆13Jul 12, 2017Updated 8 years ago
- Deep learning based alignment-free method for protein family modeling and prediction☆16Jul 31, 2018Updated 7 years ago
- Chromatin Accessibility Prediction via Convolutional Long Short-Term Memory Networks with k-mer Embedding☆15Nov 5, 2018Updated 7 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Chainer implementation of Graph Neural Networks for the Prediction of Substrate-Specific Organic Reaction Conditions☆10Apr 11, 2021Updated 5 years ago
- C++ Library for Electrostatics☆20Sep 19, 2025Updated 8 months ago
- Semantic Segmentor for Protein Structures.☆11Dec 20, 2021Updated 4 years ago
- 📓Notebook of Climente-González et al. (2017), The Functional Impact of Alternative Splicing in Cancer.☆14Mar 5, 2018Updated 8 years ago
- a universal machine learning model for predicting properties of Chemical Compounds☆11Sep 30, 2019Updated 6 years ago
- ☆60Jul 5, 2017Updated 8 years ago
- Secondary Protein Structure Prediction using Neural Networks and Deep Learning .☆10Jul 17, 2022Updated 3 years ago
- Review Paper: Deep Learning for Genomics: A Concise Overview☆13Mar 13, 2018Updated 8 years ago
- CB513 datasets for Protein Secondary Structure Prediction☆12Apr 3, 2025Updated last year
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- ☆26Dec 8, 2022Updated 3 years ago
- Protein contacts prediction using deep learning models☆78Jul 16, 2019Updated 6 years ago
- Fast pairwise sequence alignment using SeqAn, in Python.☆13Mar 23, 2019Updated 7 years ago
- Implementation of Accurate Protein Structure Prediction by Embeddings and Deep Learning Representations☆24Feb 20, 2020Updated 6 years ago
- ☆10Mar 29, 2023Updated 3 years ago
- Protein Secondary Structure predictor using Convolutional Neural Networks☆113Apr 14, 2026Updated last month
- Implementation of High Quality Protein Q8 Secondary Structure Prediction by Diverse Neural Network Architectures☆22May 9, 2019Updated 7 years ago
- Processed Cell Painting Data for the LINCS Drug Repurposing Project☆33Aug 4, 2022Updated 3 years ago
- Protein contacts prediction using deep learning models☆40Jan 16, 2019Updated 7 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Collection of tools for running MD, QM, and QM/MM calculations☆20Sep 27, 2025Updated 8 months ago
- Deep convolutional neural networks for protein contact map prediction☆23Aug 5, 2019Updated 6 years ago
- Deep Molecular Dreaming☆26May 25, 2024Updated 2 years ago
- QMCPACK Users Workshop 2019☆13May 24, 2019Updated 7 years ago
- Train and fine-tune diffusion models. Perform image-to-image class transfer experiments.☆15Feb 13, 2025Updated last year
- Amino-Acid Sequence Annotation Predictor (ASAP)☆25May 13, 2020Updated 6 years ago
- Compare optimized geometries and energies from various force fields with respect to a QM reference.☆14Apr 19, 2021Updated 5 years ago
- Protein function prediction using a variational autoencoder☆94Mar 7, 2018Updated 8 years ago
- Benchmark data for density-functional theory method development.☆19May 22, 2026Updated last week
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Set of scripts to automate the calculation of crystal lattice energies.☆14Oct 17, 2024Updated last year
- JAEGER is a deep generative approach for small-molecule design☆30Dec 21, 2021Updated 4 years ago
- libdlfind is a C-API and Python interface to the DL-FIND geometry optimization library☆24Apr 6, 2024Updated 2 years ago
- Computer aided proximal decaging as a universal strategy for temporal protein activation☆28May 26, 2025Updated last year
- A Deep Learning Model for Protein Function Prediction☆18Jul 31, 2020Updated 5 years ago
- deepnn architecture for generating monophonic melodies conditioned on chords☆13Apr 15, 2019Updated 7 years ago
- Using Naive Bayes classification approach to identify the different species of Iris flowers.☆24Oct 31, 2019Updated 6 years ago