inferring RBP binding sites and motifs using local and global CNNs
☆19Sep 29, 2019Updated 6 years ago
Alternatives and similar repositories for iDeepE
Users that are interested in iDeepE are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- DLPRB: A Deep Learning Approach for Predicting Protein-RNA Binding☆13Nov 29, 2018Updated 7 years ago
- inferring sequence-structure motifs using deep learning☆40Aug 3, 2023Updated 2 years ago
- Deep Motif (ICLR16)/ Deep Motif Dashboard (PSB17): Visualizing Genomic Sequence Classifications☆46Apr 19, 2019Updated 6 years ago
- This is the source code of CubicGAN generating cubic crystal structures using improved WGAN.☆10Jun 6, 2022Updated 3 years ago
- Source code for "Unsupervised Object Representation Learning using Translation and Rotation Group Equivariant VAE," in pytorch. NeurIPS 2…☆19Jan 13, 2023Updated 3 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Implementation of IJCAI15 cascade cnn and LSTM for protein secondary structure prediction☆37May 21, 2017Updated 8 years ago
- For training very deep networks☆10Jun 12, 2017Updated 8 years ago
- Learning structural motif representations for efficient protein structure search☆20May 2, 2017Updated 8 years ago
- ☆19Aug 29, 2025Updated 7 months ago
- 🚬前端自动化测试理论到实战☆12Apr 20, 2021Updated 4 years ago
- TBiNet: A deep neural network for predicting transcription factor binding sites using attention mechanism☆25Jan 14, 2021Updated 5 years ago
- contrastive learning and pre-trained encoder for protein-ligand binding sites prediction☆37Jul 4, 2025Updated 8 months ago
- iDeepV: predicting RBP binding sites using vector representation learned from sequences with a CNN.☆10Jul 16, 2019Updated 6 years ago
- Neural networks for amino acid sequences☆22Feb 26, 2018Updated 8 years ago
- End-to-end encrypted email - Proton Mail • AdSpecial offer: 40% Off Yearly / 80% Off First Month. All Proton services are open source and independently audited for security.
- Browser plugin-free CIF visualization: comparison of the open-source engines☆22Jul 17, 2020Updated 5 years ago
- A Game Engine Made in Python with the Pygame Module☆18Jun 3, 2022Updated 3 years ago
- Repository for the Epigenomics Tutorial hold at ISMB 2017 in Prague☆14Aug 19, 2020Updated 5 years ago
- Leveraging Local and Global Patterns for Self-Attention Networks☆12Jun 3, 2019Updated 6 years ago
- Protein Interface Prediction using Graph Convolutional Networks☆93Oct 2, 2020Updated 5 years ago
- Implementation for "SoundCLR: Contrastive Learning of Representations For Improved Environmental Sound Classification," in pytorch.☆28Jan 18, 2024Updated 2 years ago
- Distributed Feedback-Looped Networks☆10Jan 15, 2020Updated 6 years ago
- Postman 自动化测试示例服务端程序☆14Apr 19, 2016Updated 9 years ago
- Unsupervised fingerprinting of disordered solids leading to analogical materials discovery.☆10Feb 14, 2023Updated 3 years ago
- DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Researching the forward-backward algorithm☆11Aug 3, 2018Updated 7 years ago
- 目前多流形学习算法matlab代码☆13Nov 23, 2018Updated 7 years ago
- 📦 A Command Line Tool for downloading protein structures, sequences and MSAs☆10Nov 21, 2017Updated 8 years ago
- The MolE pre-training framework to learn general molecular representations from unlabeled structures☆12May 26, 2025Updated 10 months ago
- This is a repo for the Machine Learning Immunogenicity Team in the August 2016 NCBI Hackathon☆24Oct 28, 2016Updated 9 years ago
- SPVec: A Word2vec-inspired feature representation method for Drug-Target Interaction Prediction☆20Jan 8, 2020Updated 6 years ago
- Python library for identification and masking of low-complexity regions in nucleotide sequences☆10Updated this week
- dmne is an algorithm to learn node representations from multi-network data.☆14Aug 1, 2018Updated 7 years ago
- Python Implementation of MetaNeighbor scRNAseq Analysis Method☆10Nov 11, 2025Updated 4 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting with the flexibility to host WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Cloudways by DigitalOcean.
- Detect whether the current shell is running under mosh☆13Sep 18, 2023Updated 2 years ago
- structured sparsity regularization☆14Oct 12, 2019Updated 6 years ago
- The ChIP-Seq peak calling algorithm using convolution neural networks☆15Jan 18, 2021Updated 5 years ago
- Transcriptional regulatory network inference from gene expression and prior information with LASSO-StARS☆15May 3, 2022Updated 3 years ago
- Code for Paper DeepTarget, especially LSTM autoencoder☆12Nov 6, 2017Updated 8 years ago
- Scalable graph neural networks for materials property prediction☆63Feb 2, 2026Updated last month
- Sensor Data Mining and Activity Recognition Using Cellphone Accelerometer☆10Sep 2, 2017Updated 8 years ago