inferring RBP binding sites and motifs using local and global CNNs
☆20Sep 29, 2019Updated 6 years ago
Alternatives and similar repositories for iDeepE
Users that are interested in iDeepE are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- DLPRB: A Deep Learning Approach for Predicting Protein-RNA Binding☆13Nov 29, 2018Updated 7 years ago
- iDeep: integrated prediction of RNA-protein binding sites using deep learning☆39Oct 7, 2020Updated 5 years ago
- Energy-based Graph Convolutional Networks for Scoring Protein Docking Models☆11Aug 31, 2021Updated 5 years ago
- inferring sequence-structure motifs using deep learning☆40Aug 3, 2023Updated 3 years ago
- Deep Motif (ICLR16)/ Deep Motif Dashboard (PSB17): Visualizing Genomic Sequence Classifications☆46Apr 19, 2019Updated 7 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Python Bioinformatics Toolkit for CATH (Protein Classification Database @ UCL)☆17Sep 30, 2024Updated last year
- NODE-SELECT: A Graph Neural Network Based On A Selective Propagation Technique☆21May 4, 2022Updated 4 years ago
- This is the source code of CubicGAN generating cubic crystal structures using improved WGAN.☆11Jun 6, 2022Updated 4 years ago
- Source code for "Unsupervised Object Representation Learning using Translation and Rotation Group Equivariant VAE," in pytorch. NeurIPS 2…☆19Jan 13, 2023Updated 3 years ago
- A Game Engine Made in Python with the Pygame Module☆18Jun 3, 2022Updated 4 years ago
- Implementation of IJCAI15 cascade cnn and LSTM for protein secondary structure prediction☆37May 21, 2017Updated 9 years ago
- Repository for the paper "Unsupervised Representation Learning of Spatial Data via Multimodal Embedding"☆12Dec 5, 2019Updated 6 years ago
- For training very deep networks☆10Jun 12, 2017Updated 9 years ago
- Deep neural network (DNN) with weight sparsity control (i.e., L1-norm regularization) improved the classification performance using whole…☆22Sep 16, 2021Updated 4 years ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- 🚬前端自动化测试理论到实战☆12Apr 20, 2021Updated 5 years ago
- Learning structural motif representations for efficient protein structure search☆20May 2, 2017Updated 9 years ago
- TBiNet: A deep neural network for predicting transcription factor binding sites using attention mechanism☆25Jan 14, 2021Updated 5 years ago
- Code for Paper DeepTarget, especially LSTM autoencoder☆12Nov 6, 2017Updated 8 years ago
- iDeepV: predicting RBP binding sites using vector representation learned from sequences with a CNN.☆10Jul 16, 2019Updated 7 years ago
- Distributed Feedback-Looped Networks☆10Jan 15, 2020Updated 6 years ago
- ☆19Aug 29, 2025Updated last year
- Repository for the Epigenomics Tutorial hold at ISMB 2017 in Prague☆14Aug 19, 2020Updated 6 years ago
- Neural networks for amino acid sequences☆22Feb 26, 2018Updated 8 years ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- ☆11Mar 24, 2023Updated 3 years ago
- 📦 A Command Line Tool for downloading protein structures, sequences and MSAs☆10Nov 21, 2017Updated 8 years ago
- Browser plugin-free CIF visualization: comparison of the open-source engines☆23Jul 17, 2020Updated 6 years ago
- Code accompanying the paper "Deciphering regulatory DNA sequences and noncoding genetic variants using neural network models of massively…☆13May 9, 2026Updated 3 months ago
- Leveraging Local and Global Patterns for Self-Attention Networks☆12Jun 3, 2019Updated 7 years ago
- Protein Interface Prediction using Graph Convolutional Networks☆93Oct 2, 2020Updated 5 years ago
- Postman 自动化测试示例服务端程序☆15Apr 19, 2016Updated 10 years ago
- ☆10May 16, 2020Updated 6 years ago
- Unsupervised fingerprinting of disordered solids leading to analogical materials discovery.☆10Feb 14, 2023Updated 3 years ago
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- Researching the forward-backward algorithm☆11Aug 3, 2018Updated 8 years ago
- This is the source code for the tutorial http://dtoebe.com/post/simple_markdown_editor_in_go-qml/☆13May 16, 2016Updated 10 years ago
- structured sparsity regularization☆14Oct 12, 2019Updated 6 years ago
- 目前多流形学习算法matlab代码☆13Nov 23, 2018Updated 7 years ago
- Extract ligands from original PDB file☆10Nov 1, 2019Updated 6 years ago
- The MolE pre-training framework to learn general molecular representations from unlabeled structures☆12May 26, 2025Updated last year
- Chromatin Accessibility Prediction via Convolutional Long Short-Term Memory Networks with k-mer Embedding☆15Nov 5, 2018Updated 7 years ago