xypan1232 / iDeepE
inferring RBP binding sites and motifs using local and global CNNs
☆16Updated 5 years ago
Related projects ⓘ
Alternatives and complementary repositories for iDeepE
- Deep Generative Models for Drug Combination (Graph Set) Generation given Hierarchical Disease Network Embedding☆30Updated last year
- ☆60Updated 5 years ago
- Interpreting graph convolutional filters of target prediction network☆48Updated 5 years ago
- This is the repository containing the source code for my Master's thesis research, about predicting drug-target interaction using deep le…☆41Updated 5 years ago
- ☆7Updated 8 years ago
- Recent application of graph neural network in drug discovery☆10Updated 4 years ago
- AAAI 2020: Chemically Interpretable Graph Interaction Network for Prediction of Pharmacokinetic Properties of Drug-like Molecules☆35Updated 2 years ago
- Implementation of IJCAI15 cascade cnn and LSTM for protein secondary structure prediction☆38Updated 7 years ago
- Protein Interface Prediction using Graph Convolutional Networks☆91Updated 4 years ago
- Three-Dimensionally Embedded Graph Convolutional Network (3DGCN) for Molecule Interpretation☆55Updated 5 years ago
- Compute protein contact map from PDB file.☆10Updated 7 years ago
- Deep learning-based drug-target interaction prediction / Deep belief net (DBN) based on Theano☆47Updated 5 years ago
- Protein-protein interaction sites prediction through combining local and global features with deep neural networks☆52Updated 5 years ago
- ☆15Updated 6 years ago
- Recurrent Geometric Network in Pytorch☆29Updated 4 years ago
- Guided Conditional Wasserstein GAN for De Novo Protein Design☆37Updated 3 years ago
- ☆54Updated 5 years ago
- ☆59Updated 5 years ago
- Improving protein function prediction with synthetic feature samples created by generative adversarial networks☆22Updated 4 years ago
- Pytorch implementation of BionoiNet, which is a deep learning-based software to classify ligand-binding sites.☆19Updated 3 years ago
- InterpretableDTIP☆19Updated 6 years ago
- Algorithms for prediction of drug-target interactions via computational (chemogenomic) methods☆43Updated 5 years ago
- DeepGS: Deep Representation Learning of Graphs and Sequences for Drug-Target Binding Affinity Prediction (ECAI 2020)☆26Updated 4 years ago
- ☆25Updated 4 years ago
- Scripts for running lsc model on other datasets☆13Updated 5 years ago
- ProtVec can be used in protein interaction predictions, structure prediction, and protein data visualization.☆33Updated last year
- CapsNet for Protein Post-translational Modification site prediction.☆25Updated 4 years ago
- ☆19Updated last year
- A Spatial-temporal Gated Attention Module for Molecular Property Prediction Based on Molecular Geometry☆31Updated 3 years ago