Alternatives and similar repositories for flaskomics

Users that are interested in flaskomics are comparing it to the libraries listed below

• monarch-initiative / dipper
  Data Ingestion Pipeline for Monarch
  ☆57Updated 2 years ago
• edamontology / edamontology
  EDAM is an ontology of data analysis and data management in bio- and other sciences, and science-based applications. It comprises concept…
  ☆130Updated 3 weeks ago
• askomics / askomics
  DEPRECATED. See askomics/flaskomics
  ☆21Updated 5 years ago
• EBISPOT / DUO
  Ontology for consent codes and data use requirements
  ☆67Updated 3 years ago
• cidgoh / DataHarmonizer
  A standardized browser-based spreadsheet editor and validator that can be run offline and locally, and which includes templates for SARS-…
  ☆112Updated 2 weeks ago
• jamesaoverton / obo-tutorial
  A tutorial on using Open Biological and Biomedical Ontologies (OBO)
  ☆61Updated 6 years ago
• Planteome / plant-trait-ontology
  Explore the Plant Trait Ontology on the Planteome site.
  ☆47Updated 2 weeks ago
• monarch-initiative / monarch-legacy
  Monarch web application and API
  ☆42Updated 5 years ago
• EBISPOT / zooma
  ZOOMA - Optimal Ontology Mapping Application. http://www.ebi.ac.uk/spot/zooma.
  ☆28Updated 3 months ago
• Knowledge-Graph-Hub / kg-microbe
  ☆20Updated this week
• GMOD / Chado
  the GMOD database schema
  ☆42Updated last year
• owlcollab / owltools
  OWLTools
  ☆116Updated last year
• monarch-initiative / monarch-disease-ontology-RETIRED
  THIS IS THE OLD REPO: Use this one instead: https://github.com/monarch-initiative/mondo-build
  ☆17Updated 4 years ago
• phenopackets / phenopacket-format
  ☆26Updated 6 years ago
• monarch-initiative / owlsim-v3
  Ontology Based Profile Matching
  ☆17Updated 3 years ago
• GenomicsStandardsConsortium / mixs
  Minimum Information about any (X) Sequence” (MIxS) specification
  ☆53Updated this week
• Rothamsted / knetminer
  KnetMiner - webapp to search and visualize genome-scale knowledge graphs
  ☆29Updated last month
• seek4science / seek
  For finding, sharing and exchanging Data, Models, Simulations and Processes in Science.
  ☆89Updated this week
• arpcard / aro
  The Antibiotic Resistance Ontology (ARO) organizes the information describing the ability of a microorganism to withstand the effects of …
  ☆20Updated 2 weeks ago
• pato-ontology / pato
  PATO - the Phenotype And Trait Ontology
  ☆59Updated 2 weeks ago
• TheJacksonLaboratory / hpo-web
  a web application to search and navigate the Human Phenotype Ontology (HPO)
  ☆14Updated last week
• OBOFoundry / purl.obolibrary.org
  A system for managing OBO PURLs
  ☆85Updated this week
• fairgenomes / fairgenomes-semantic-model
  FAIR Genomes semantic metadata model. The core is a YAML file, which is transformed into all other desired output formats.
  ☆13Updated last week
• obophenotype / ncbitaxon
  Build for NCBITaxon
  ☆30Updated this week
• obophenotype / upheno
  The Unified Phenotype Ontology (uPheno) integrates multiple phenotype ontologies into a unified cross-species phenotype ontology.
  ☆81Updated last week
• EBISPOT / efo
  Github repo for the Experimental Factor Ontology (EFO)
  ☆60Updated last week
• The-Sequence-Ontology / SO-Ontologies
  Collect of SO Ontologies
  ☆101Updated last month
• oborel / obo-relations
  RO is an ontology of relations for use with biological ontologies
  ☆100Updated last week
• MaastrichtUniversity / ols-docker
  Dockerized version of the EBI Ontology Lookup Service
  ☆10Updated 6 years ago
• OBF / FALDO
  Feature Annotation Location Description Ontology
  ☆34Updated 5 years ago