Alternatives and similar repositories for pmi

Users that are interested in pmi are comparing it to the libraries listed below

• AZCompTox / AZOrange
  AstraZeneca add-ons to Orange.
  ☆22Updated 5 years ago
• jrash / chemmodlab
  chemmodlab: A Cheminformatics Modeling Laboratory for Fitting and Assessing Machine Learning Models
  ☆17Updated 2 years ago
• mmtsb / toolset
  MMTSB Tool Set
  ☆31Updated last month
• insilichem / tangram
  A collection of molecular modelling tools for UCSF Chimera
  ☆17Updated 6 years ago
• Degiacomi-Lab / biobox
  a toolbox for the manipulation, modelling and analysis of molecular structures
  ☆27Updated 8 months ago
• XiaohuaZhangLLNL / VinaLC
  A parallel molecular docking program based on AutoDock Vina
  ☆19Updated 3 weeks ago
• PhilippJunk / homelette
  A unified and modular interface to homology modelling software
  ☆11Updated last year
• DLab / RIP-MD
  ☆15Updated 7 years ago
• insilichem / gaudi
  GaudiMM: A modular optimization platform for molecular design
  ☆32Updated last year
• Becksteinlab / propkatraj
  pKa estimates for proteins using an ensemble approach
  ☆28Updated this week
• KULL-Centre / pdbwords
  Printing text using protein structures
  ☆13Updated 3 years ago
• phi-grib / flame
  Modeling framework for eTRANSAFE project
  ☆13Updated last month
• ram-compbio / CANDO
  Computational Analysis of Novel Drug Opportunities
  ☆36Updated last month
• gersteinlab / STRESS
  ☆8Updated 6 years ago
• rinikerlab / Physical_Chemistry_Practicum-Molecular_Dynamics_Simulations
  This repository is the used for teaching the Physical Chemistry Practicum about Molecular Dynamics (MD) simulations for pharmacy and biol…
  ☆11Updated 2 months ago
• dkoes / show_contacts
  PyMOL Plugin for displaying polar contacts
  ☆17Updated 6 years ago
• azevedolab / sandres
  SAnDReS (Statistical Analysis of Docking Results and Scoring functions) is a free and open-source computational environment for the devel…
  ☆20Updated 8 months ago
• leeping / OpenMM-MD
  Lee-Ping's general purpose script for running OpenMM molecular dynamics simulations
  ☆28Updated last year
• fkaiserbio / fit3d
  🔍 Fit3D - An application for template-based detection of small structural motifs in protein structures and macromolecular structure data…
  ☆11Updated 6 years ago
• moldyn / Clustering
  Robust and stable clustering of molecular dynamics simulation trajectories.
  ☆18Updated 2 years ago
• MooersLab / pymolsnips
  Pymolsnips is a library of PyMOL scripting language code fragments for several popular text editors.
  ☆42Updated last year
• MobleyLab / Training
  Lab policies, training, style guides, etc.
  ☆35Updated last year
• MobleyLab / off-ffcompare
  Compare molecular structures after energy minimization in various force fields.
  ☆10Updated 4 years ago
• dkoes / shapedb
  ☆16Updated 6 years ago
• choderalab / ensembler
  Automated omics-scale protein modeling and simulation setup.
  ☆53Updated 3 years ago
• hutchisonlab / molecular-entropies
  Data and analysis scripts for understanding molecular entropies, including conformer flexibility
  ☆11Updated 4 years ago
• pandegroup / vs-utils
  Virtual screening and cheminformatics utilities
  ☆14Updated 9 years ago
• CSB-KaracaLab / prot-on
  This repo contains the collection of codes to find designer interfacial mutations
  ☆17Updated last year
• psa-lab / siteinterlock
  A toolkit for predicting the binding mode of small molecules interacting with proteins based on interfacial rigidification, as assessed b…
  ☆9Updated 8 years ago
• liedllab / X-Entropy
  This package is meant to calculate the dihedral entropy of a biomolecule. However, it can also calculate the entropy of any binnable dat…
  ☆23Updated last year