BioMedicalBigDataMiningLab / lncRNA-protein-interaction-predictionLinks
The source codes for our paper submitted to Neurocomputing in 2017. We propose a linear label propagation method (LPLNP method) to predict unknown lncRNA-protein interactions. In this repository, you can find our dataset and code of individual LPLNP, intergrated LPLNP models, and other state-of-the-art methods. Please follow the Guideline.pdf.
☆18Updated 8 years ago
Alternatives and similar repositories for lncRNA-protein-interaction-prediction
Users that are interested in lncRNA-protein-interaction-prediction are comparing it to the libraries listed below
Sorting:
- ☆17Updated 7 years ago
- Inferring disease-associated miRNAs☆10Updated 5 years ago
- Random Walk with Restart on Multiplex and Heterogeneous Biological Networks☆36Updated 5 years ago
- Heterogeneous disease-gene-related☆18Updated 3 years ago
- A Network Integration Approach for Drug-Target Interaction Prediction☆181Updated 2 years ago
- Python 2.7 package with examples for evaluating a network's ability to group a given node set in network proximity.☆32Updated 2 years ago
- Toolbox - generic utilities for data processing (e.g., parsing, proximity, guild scoring, etc...)☆111Updated 3 years ago
- PGCN: Disease gene prioritization by disease and gene embedding through GCN☆79Updated last year
- BNNR is a novel computational method, which utilizes Bounded Nuclear Norm Regularization algorithm to identify potential novel indication…☆11Updated 2 years ago
- ☆25Updated 2 years ago
- this is the source code and data☆18Updated 6 years ago
- ☆10Updated 6 years ago
- 利用深度学习模型挖掘CircRNA-Disease之间的关联☆18Updated 4 years ago
- DeepTTC: a transformer-based model for predicting cancer drug response☆16Updated 2 years ago
- Prediction of mRNA subcellular localization using deep recurrent neural networks☆15Updated 5 years ago
- Python Implementation of SIMLR for single-cell visualization and analysis☆23Updated 2 years ago
- Supplementary code for the paper: Network Medicine Framework for Identifying Drug Repurposing Opportunities for COVID-19☆27Updated 4 years ago
- ☆20Updated 4 years ago
- ☆23Updated 8 years ago
- Predicting lncRNA-disease associations in heterogeneous network based on deep learning method.☆12Updated 5 years ago
- MOLI: Multi-Omics Late Integration with deep neural networks for drug response prediction☆55Updated 4 years ago
- Gene ontology (GO) semantic similarity library for Python☆23Updated 6 years ago
- using shallow neural network layer (embedding) to infer gene-gene/sample relationship from gene expression data☆21Updated 6 years ago
- bioinformatics,miRNA, circRNA, lncRNA, microbe, protein, drug, disease, virus☆31Updated 2 years ago
- scDeepCluster for Single Cell RNA-seq data☆101Updated last year
- covolutional neural network based coexpression analysis☆78Updated 5 years ago
- ☆17Updated 9 months ago
- Imputing Single-cell RNA-seq data by combining Graph Convolution and Autoencoder Neural Networks☆19Updated last year
- ☆57Updated 5 years ago
- iLearn, a Python Toolkit and Web Server Integrating the Functionality of Feature Calculation, Extraction, Clustering, Feature Selection, …☆82Updated 2 years ago