The source codes for our paper submitted to Neurocomputing in 2017. We propose a linear label propagation method (LPLNP method) to predict unknown lncRNA-protein interactions. In this repository, you can find our dataset and code of individual LPLNP, intergrated LPLNP models, and other state-of-the-art methods. Please follow the Guideline.pdf.
☆18Jun 5, 2017Updated 9 years ago
Alternatives and similar repositories for lncRNA-protein-interaction-prediction
Users that are interested in lncRNA-protein-interaction-prediction are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A hierarchical deep learning framework for ncRNA-protein interaction prediction.☆14Nov 25, 2022Updated 3 years ago
- Scalable Semi-Supervised Learning by Efficient Anchor Graph Regularization☆13Jun 20, 2018Updated 7 years ago
- This project explores the different techniques (both scalable and non scalable) for Graph based semi supervised learning. Recent techniqu…☆14May 28, 2016Updated 10 years ago
- ☆11Feb 18, 2020Updated 6 years ago
- A deep learning model to predict anticancer peptides.☆24Jul 10, 2019Updated 6 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- R packages☆13Updated this week
- ☆16Jul 30, 2016Updated 9 years ago
- ProNA2020: System predicting protein-DNA, protein-RNA and protein-protein binding sites from sequence☆14Aug 7, 2020Updated 5 years ago
- ☆17Jul 30, 2016Updated 9 years ago
- CoGO: a contrastive learning framework to predict disease similarity based on gene network and ontology structure☆16Sep 30, 2024Updated last year
- The code for SAG-DTA: Prediction of Drug–Target Affinity Using Self-Attention Graph Network.☆11Dec 27, 2021Updated 4 years ago
- A lightweight and flexible analysis pipeline☆12May 22, 2026Updated 2 weeks ago
- Transform data from RCSB Protein Data Bank for secondary structure prediction☆12Feb 20, 2019Updated 7 years ago
- Pipeline to call somatic cancer neoantigens from mutations in patient tumor DNA☆14Feb 16, 2023Updated 3 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- A Network Integration Approach for Drug-Target Interaction Prediction☆188Oct 30, 2022Updated 3 years ago
- Scripts and Data associated with our publication on genomic signatures to discriminate LUAD and LUSC lung cancer types using TCGA data☆11Mar 2, 2022Updated 4 years ago
- ☆16Jun 9, 2025Updated last year
- Modelling RBP binding preferences to predict RPB binding sites☆11Aug 11, 2023Updated 2 years ago
- ☆18Nov 24, 2019Updated 6 years ago
- ☆13Oct 3, 2017Updated 8 years ago
- Graph-Based Semi-Supervised Learning Algorithms☆23May 7, 2016Updated 10 years ago
- ☆10Jun 21, 2025Updated 11 months ago
- Predicts if Protein will reside in the protein corona on the surface of engineered nanomaterials☆12Jun 21, 2022Updated 3 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Debug tool to watch objects/expressions while running an R script☆17Jul 25, 2018Updated 7 years ago
- Generate signature matrix from single cell data.☆12Apr 13, 2021Updated 5 years ago
- Scripts for paper entitled "Limits in the detection of m6A changes using MeRIP/m6A-seq☆52Jan 9, 2020Updated 6 years ago
- ☆12May 24, 2022Updated 4 years ago
- MASIC generates selected ion chromatograms (SICs) for all of the parent ions chosen for fragmentation in an LC-MS/MS analysis, characteri…☆18Dec 4, 2025Updated 6 months ago
- An interpretable machine learning algorithm to predict disordered protein phase separation based on biophysical interactions☆13Apr 10, 2026Updated last month
- Deep learning prediction of protein residue-residue distances☆23Jun 28, 2022Updated 3 years ago
- Codes and datasets for the paper entitle "Predicting microRNA-disease associations from lncRNA-microRNA interactions via multi-view multi…☆11Dec 3, 2019Updated 6 years ago
- MATLAB code for Relevance Vector Machine using SB2_Release_200.☆58Feb 21, 2022Updated 4 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- This is the R implementation of a robust correlation matrix estimator usefull in case of high-dimensional data to remove the bias. It al…☆14Mar 10, 2019Updated 7 years ago
- Docking benchmark 5 - cleaned and ready to use for HADDOCK☆14Apr 13, 2026Updated last month
- This project implenments the OSPF using Dijkstra algorithm (Open Shortest Path First) network protocol in python. Link-State Routing pr…☆12Sep 1, 2017Updated 8 years ago
- ☆12Aug 30, 2021Updated 4 years ago
- A deep learning-based lncRNA subcellular localization predictor☆16Aug 17, 2022Updated 3 years ago
- Python implementation of the random-walk inductive classification algorithm Modified Adsorption from P. Talukdar☆15Jul 30, 2014Updated 11 years ago
- R package for systems biology modeling☆17May 13, 2017Updated 9 years ago