BioMedicalBigDataMiningLab / lncRNA-protein-interaction-prediction
The source codes for our paper submitted to Neurocomputing in 2017. We propose a linear label propagation method (LPLNP method) to predict unknown lncRNA-protein interactions. In this repository, you can find our dataset and code of individual LPLNP, intergrated LPLNP models, and other state-of-the-art methods. Please follow the Guideline.pdf.
☆17Updated 7 years ago
Alternatives and similar repositories for lncRNA-protein-interaction-prediction:
Users that are interested in lncRNA-protein-interaction-prediction are comparing it to the libraries listed below
- Inferring disease-associated miRNAs☆10Updated 5 years ago
- ☆17Updated 6 years ago
- Heterogeneous disease-gene-related☆18Updated 3 years ago
- BNNR is a novel computational method, which utilizes Bounded Nuclear Norm Regularization algorithm to identify potential novel indication…☆11Updated 2 years ago
- Random Walk with Restart on Multiplex and Heterogeneous Biological Networks☆36Updated 5 years ago
- ☆23Updated 8 years ago
- Prediction of mRNA subcellular localization using deep recurrent neural networks☆14Updated 5 years ago
- DeepTTC: a transformer-based model for predicting cancer drug response☆15Updated last year
- PhosIDN: an integrated deep neural network for improving protein phosphorylation site prediction by combining sequence and protein–protei…☆11Updated 4 years ago
- Algorithms for prediction of drug-target interactions via computational (chemogenomic) methods☆44Updated 5 years ago
- Toolbox - generic utilities for data processing (e.g., parsing, proximity, guild scoring, etc...)☆110Updated 3 years ago
- MOLI: Multi-Omics Late Integration with deep neural networks for drug response prediction☆54Updated 4 years ago
- Gene ontology (GO) semantic similarity library for Python☆23Updated 6 years ago
- Python 2.7 package with examples for evaluating a network's ability to group a given node set in network proximity.☆32Updated 2 years ago
- ☆56Updated 5 years ago
- ☆10Updated 2 years ago
- ☆25Updated 2 years ago
- PGCN: Disease gene prioritization by disease and gene embedding through GCN☆78Updated last year
- Prediction of lncRNA-disease associations based on inductive matrix completion