genome / ptero
☆9Updated 8 years ago
Related projects: ⓘ
- ☆12Updated 7 years ago
- A Clojure library designed to make the manipulation of biological sequence data easier.☆77Updated 7 years ago
- Tool to upload SARS-CoV-2 sequences to BH20 Arvados instance and orchestrate analysis☆13Updated 2 years ago
- Home of the Genomic Feature and Variation Ontology (GFVO)☆16Updated 3 years ago
- Parallel Recipes : parallel workflow execution made easy☆13Updated 9 years ago
- A genomics pipeline build on top of the GATK Queue framework. Main repository: https://github.com/NationalGenomicsInfrastructure/piper (m…☆21Updated 8 years ago
- Archives and examples of how to use jmol, biojava, and basic bioinformatics applications in a LISP environment.☆16Updated 9 years ago
- Docker containers that demonstrate a proof of concept bwa alignment workflow☆14Updated 9 years ago
- (Clojure-like) Lazy iterators in Python☆20Updated last year
- lightning☆11Updated 8 years ago
- Seed of a bioclojure library☆37Updated 13 years ago
- The SnoVault general purpose hybrid object-relational database☆16Updated 6 months ago
- A tool for running bioinformatics workflows locally or in the cloud.☆29Updated 4 years ago
- High throughput, pain-free big data pipelines.☆30Updated 7 years ago
- Set of tools for viral metagenomics.☆13Updated 9 months ago
- Basic, no assumptions, multi-pileup☆24Updated 10 years ago
- Variant Caller Analysis Dashboard and Data Management System☆35Updated 8 years ago
- Manage the visualization of large amounts of other people's [often messy] genomics data☆18Updated 8 years ago
- Lightweight workflows in bioinformatics:☆23Updated 9 years ago
- Trigger the Google Genomics Pipeline API with CWL☆11Updated 7 years ago
- ☆13Updated this week
- succinct labeled graphs with collections and paths☆15Updated 5 years ago
- Directly create a bigwig file with signal derived from a sorted and indexed bam file.☆11Updated 7 years ago
- deBGR: An Efficient and Near-Exact Representation of the Weighted de Bruijn Graph☆30Updated 3 years ago
- Data portal for submitting and viewing genomic data☆13Updated this week
- A DNA Sequence Alignment/Map (SAM) library for Clojure☆90Updated 2 weeks ago
- Benchmarking toolkit for variant calling☆47Updated 3 years ago
- Workflows written in common workflow language (CWL)☆14Updated 5 years ago
- Normalization and difference calling for Next Generation Sequencing (NGS) data via joint multinomial modeling.☆11Updated 2 years ago