NCI-GDC / psqlgraph
Library for graph-like storage in postgresql using sqlalchemy
☆22Updated last week
Alternatives and similar repositories for psqlgraph:
Users that are interested in psqlgraph are comparing it to the libraries listed below
- Translation layer between the GDC Data Dictionary and psqlgraph☆28Updated 10 months ago
- base documentation site for Singularity software☆27Updated 3 years ago
- The SnoVault general purpose hybrid object-relational database☆16Updated 11 months ago
- Example Cloud Datalab iPython Notebooks for genomics use cases.☆25Updated 7 years ago
- An implementation of Nextflow.io with Language Workbench Technology. The project helps create computational pipelines that run with the N…☆22Updated 8 years ago
- Home of the Genomic Feature and Variation Ontology (GFVO)☆16Updated 3 years ago
- Exercises for training scientists to perform some RNA-seq analyses.☆11Updated 5 years ago
- Data dictionary for the GDC☆52Updated 5 months ago
- Continuous administration of the Greene Lab's electronic scrum☆13Updated this week
- Javascript library for visualizing genomics data with D3.☆19Updated 8 years ago
- Framework for running text mining tools on latest publications. Main page at:☆14Updated 2 years ago
- The command-line interface to GGD☆42Updated 2 years ago
- Workshop bringing together individuals interested in developing curriculum, workflows, and tools to strengthen reproducibility in researc…☆33Updated 9 years ago
- Core consonance utilities for scheduling, reporting on, and provisioning VMs for workflows☆14Updated 6 years ago
- Target discovery platform for exploring rankings of genes, disease models, and other entities. @JKU-ICG @datavisyn☆12Updated 11 months ago
- Tools for developing and running pipelines with the Genomics API☆24Updated 5 years ago
- GWAS Catalog Ontology and Curation Infrastructure☆26Updated last month
- A web application from the Raphael Lab for mutation annotation and genome interpretation.☆20Updated 7 years ago
- Image and VM management for Jenkins, Spark and Mesos clusters in EC2☆22Updated 4 years ago
- A language server for Common Workflow Language☆67Updated last year
- Build project for all CEDAR Java repositories☆13Updated 3 months ago
- qtools has helper functions to submit jobs to compute clusters (PBS on TSCC, SGE on oolite) from within Python☆21Updated last year
- Data Standards Hackathon for NGS based typing.☆13Updated this week
- FDA High-performance Integrated Virtual Environment (HIVE)☆35Updated 4 years ago
- Tutorial on programming or "big data"/bioinformatics☆33Updated 7 years ago
- Code for the data processing pipeline☆17Updated 3 years ago
- A tool for running bioinformatics workflows locally or in the cloud.☆30Updated 5 years ago
- The Gene Ontology Helpdesk☆16Updated 2 weeks ago
- www.commonwl.org☆10Updated 3 months ago
- Workflow Description Language compiler for the DNAnexus platform☆40Updated last year