everycure-org / matrixLinks
☆37Updated this week
Alternatives and similar repositories for matrix
Users that are interested in matrix are comparing it to the libraries listed below
Sorting:
- A package to transform all OBO ontologies into KGX TSV format and OBO json, and put the transformed graph in KGhub☆32Updated last year
- Data Ingestion Pipeline for Monarch☆57Updated 3 years ago
- the GMOD database schema☆45Updated last year
- This repository contains training material for querying SIB (Swiss Institute of Bioinformatics) resources with SPARQL.☆12Updated last year
- An information model for representing variant annotations.☆26Updated this week
- Public repository for the biodata resource inventory performed in 2022.☆11Updated 2 months ago
- ☆18Updated 6 years ago
- ☆14Updated 3 weeks ago
- R package for easy access, manipulation, and analysis of the Monarch Initiative or other KGX-formatted knowledge graphs.☆16Updated 2 months ago
- Extensible specification for representing and uniquely identifying biological sequence variation☆94Updated this week
- Rebuild of AskOmics☆14Updated 5 months ago
- LLM retrieval augmented generation agent for the Monarch Knowledge graph.☆26Updated 4 months ago
- 🗺️ Community curated and predicted equivalences and related mappings between named biological entities that are not available from prima…☆58Updated last week
- ☆31Updated 2 months ago
- Collect of SO Ontologies☆102Updated 4 months ago
- GA4GH Variation Representation Python Implementation☆61Updated this week
- 📮 An integrative registry of biological databases, ontologies, and nomenclatures.☆140Updated last week
- This repository hosts the tracker for issues pertaining to GO annotations.☆38Updated last week
- MyVariant.info: A BioThings API for human variant annotations☆98Updated 4 months ago
- Collections of GA4GH phenopackets that represent individuals with Mendelian diseases.☆30Updated this week
- A motley crew of agents developed by the Monarch Initiative☆22Updated 2 months ago
- Minimum Information about any (X) Sequence” (MIxS) specification☆56Updated this week
- VueGen automates the creation of reports from bioinformatics outputs, supporting formats like PDF, HTML, DOCX, ODT, PPTX, Reveal.js, Jupy…☆37Updated 2 weeks ago
- Repo to organise the mouse-human phenotype mapping initiative and reconcile resources.☆13Updated 6 months ago
- Babel creates cliques of equivalent identifiers across many biomedical vocabularies.☆12Updated last week
- Github repo for the Experimental Factor Ontology (EFO)☆62Updated last week
- Example genomics data for tool developers☆117Updated last year
- Blazing-Fast Bioinformatic Operations on Python DataFrames☆144Updated this week
- Schema and generated objects for biolink data model and upper ontology☆221Updated this week
- An ontology of cell types☆188Updated last week