A python library for calculating semantic similarity between patients in N3C
☆14Oct 5, 2022Updated 3 years ago
Alternatives and similar repositories for semanticsimilarity
Users that are interested in semanticsimilarity are comparing it to the libraries listed below
Sorting:
- Customizable translation of OBO graphs to dot for visualization using graphviz and other tools☆26Feb 21, 2025Updated last year
- A registry of Knowledge Graphs, their data sources, and the ways they fit together.☆20Feb 25, 2026Updated last week
- CRDC-H model in LinkML, developed by the Center for Cancer Data Harmonization (CCDH)☆17Jan 7, 2022Updated 4 years ago
- Network Embedding All the Things☆18Oct 4, 2022Updated 3 years ago
- Computational LOINC in OWL.☆17Oct 8, 2025Updated 4 months ago
- Java library to map LOINC-encoded test results to Human Phenotype Ontology☆33Jan 16, 2024Updated 2 years ago
- Summary Dashboard for Open Biological and Biomedical Ontologies☆24Updated this week
- phenol: Phenotype ontology library☆25Dec 5, 2025Updated 3 months ago
- loinc2hpo Annotation Data☆26Aug 4, 2022Updated 3 years ago
- Standardized identifiers and OWL classes for chromosomes and chromosomal parts across species☆15Oct 20, 2025Updated 4 months ago
- Tools for working with KGCL☆19Nov 19, 2024Updated last year
- Bayesian OWL ontology merging☆34Jun 4, 2025Updated 9 months ago
- Materialize OWL existential relations☆20Nov 12, 2025Updated 3 months ago
- Bayes OWL Ontology Merging☆24Oct 3, 2024Updated last year
- Python toolkit for SSSOM mapping format☆60Feb 20, 2026Updated last week
- LLM retrieval augmented generation agent for the Monarch Knowledge graph.☆27Sep 17, 2025Updated 5 months ago
- First pass at a thin wrapper around the Monarch API and ChatGPT plugin☆12Mar 21, 2025Updated 11 months ago
- A collaborative guidebook for reusable data best practices☆13Mar 5, 2023Updated 2 years ago
- R package for easy access, manipulation, and analysis of the Monarch Initiative or other KGX-formatted knowledge graphs.☆17Feb 24, 2026Updated last week
- Data transformation framework for LinkML data models☆62Feb 9, 2026Updated 3 weeks ago
- Web app and CLI tools for working with biomedical terminologies. https://github.com/orgs/jhu-bids/projects/9/views/7☆11Dec 29, 2025Updated 2 months ago
- ☆26Aug 7, 2019Updated 6 years ago
- Repository for representing genotypes and their association with phenotypes☆20Feb 2, 2026Updated last month
- Clinical Research Informatics☆13Aug 23, 2023Updated 2 years ago
- Mapping between LinkML schemas☆31Updated this week
- OMOP2OBO: A Python Library for mapping OMOP standardized clinical terminologies to Open Biomedical Ontologies☆96Oct 3, 2023Updated 2 years ago
- Collections of GA4GH phenopackets that represent individuals with Mendelian diseases.☆33Feb 23, 2026Updated last week
- A motley crew of agents developed by the Monarch Initiative☆22Nov 17, 2025Updated 3 months ago
- The phenogrid widget☆14Mar 4, 2023Updated 3 years ago
- LLM-driven curation assist tool☆101Oct 20, 2025Updated 4 months ago
- OHDSI Ananke - A Tool for Mapping Between OHDSI Concept Identifiers to Unified Medical Language System (UMLS) identifiers☆15Sep 28, 2020Updated 5 years ago
- Ontology Access Kit: A python library and command line application for working with ontologies☆159Feb 20, 2026Updated last week
- Sketching out an RDF representation for FHIR☆44Jul 4, 2025Updated 8 months ago
- OBO Organized Knowledge: Training materials for becoming an OBO engineer☆116Feb 13, 2026Updated 2 weeks ago
- Data Ingestion and Harmonization☆46Feb 19, 2026Updated last week
- KGX is a Python library for exchanging Knowledge Graphs☆139Feb 5, 2026Updated last month
- The previous version of the Monarch Initiative website☆17Jan 26, 2024Updated 2 years ago
- A simple system for specifying OWL class design patterns for OBO-ish ontologies.☆47Dec 10, 2025Updated 2 months ago
- Ontology for representing scientific evidence and provenance information☆52Oct 2, 2025Updated 5 months ago