National-Clinical-Cohort-Collaborative / semanticsimilarity
A python library for calculating semantic similarity between patients in N3C
☆13Updated 2 years ago
Alternatives and similar repositories for semanticsimilarity:
Users that are interested in semanticsimilarity are comparing it to the libraries listed below
- Computational LOINC in OWL.☆14Updated this week
- CRDC-H model in LinkML, developed by the Center for Cancer Data Harmonization (CCDH)☆16Updated 3 years ago
- Java library to map LOINC-encoded test results to Human Phenotype Ontology☆31Updated last year
- Web app and CLI tools for working with biomedical terminologies. https://github.com/orgs/jhu-bids/projects/9/views/7☆11Updated this week
- loinc2hpo Annotation Data☆24Updated 2 years ago
- Medical action ontology☆55Updated this week
- Standardized identifiers and OWL classes for chromosomes and chromosomal parts across species☆13Updated 2 months ago
- Network Embedding All the Things☆18Updated 2 years ago
- Integrated OBO ontology store☆44Updated last month
- Summary Dashboard for Open Biological and Biomedical Ontologies☆21Updated 4 months ago
- Tools for working with KGCL☆17Updated 5 months ago
- source files for OBA (Ontology of Biological Attributes)☆27Updated last week
- Data Ingestion and Harmonization☆43Updated 2 years ago
- OMOP2OBO: A Python Library for mapping OMOP standardized clinical terminologies to Open Biomedical Ontologies☆87Updated last year
- Bayesian OWL ontology merging☆28Updated 8 months ago
- LLM retrieval augmented generation agent for the Monarch Knowledge graph.☆22Updated last month
- Customizable translation of OBO graphs to dot for visualization using graphviz and other tools☆24Updated 2 months ago
- The phenogrid widget☆13Updated 2 years ago
- Repository for representing genotypes and their association with phenotypes☆18Updated last year
- Perform text mining for identification of HPO terms in free text from scientific publication.☆12Updated 9 months ago
- A package to transform all OBO ontologies into KGX TSV format and OBO json, and put the transformed graph in KGhub☆32Updated last year
- First pass at a thin wrapper around the Monarch API and ChatGPT plugin☆13Updated last month
- Ontology for representing scientific evidence and provenance information☆50Updated 8 months ago
- Data transformation framework for LinkML data models☆52Updated last month
- A tutorial for the ROBOT command line tool.☆16Updated 2 years ago
- Mapping between LinkML schemas☆22Updated this week
- Data ingest application for Monarch Initiative knowledge graph using Koza☆16Updated last week
- OBO Library edition of NCIt☆23Updated last month
- Repository for the GA4GH phenopacket schema☆85Updated 7 months ago
- Utility for working with DOSDP design patterns and OWL ontologies☆27Updated 9 months ago