Alternatives and similar repositories for ANGEL

Users that are interested in ANGEL are comparing it to the libraries listed below

• dmis-lab / BioLAMA
  EMNLP'2021: Can Language Models be Biomedical Knowledge Bases?
  ☆57Updated 2 years ago
• Itaymanes / K-QA
  Dataset and Evaluation Code for the K-QA Benchmark.
  ☆14Updated last year
• jennydsuza9 / disorder-normalizer
  A system for normalizing disorder mentions in biomedical data.
  ☆19Updated 9 years ago
• sunlab-osu / CliniQG4QA
  CliniQG4QA: Generating Diverse Questions for Domain Adaptation of Clinical Question Answering
  ☆22Updated 4 years ago
• dmis-lab / TouR
  Findings of ACL'2023: Optimizing Test-Time Query Representations for Dense Retrieval
  ☆30Updated last year
• cambridgeltl / mop
  Codes for paper: Mixture-of-Partitions: Infusing Large Biomedical Knowledge Graphs into BERT
  ☆34Updated 3 years ago
• dhdhagar / arboEL
  Entity Linking & discovery solution. Agarwal et al., "Entity Linking via Explicit Mention-Mention Coreference Modeling", NAACL 2022.
  ☆27Updated last year
• faviq / faviq
  FaVIQ: Fact Verification from Information-seeking Questions
  ☆43Updated 2 years ago
• cambridgeltl / medlama
  ☆15Updated 3 years ago
• allenai / BEEP
  Code repository for BEEP (Biomedical Evidence Enhanced Predictions) clinical outcome prediction system
  ☆26Updated last year
• suamin / MedDistant19
  MedDistant19: Towards an Accurate Benchmark for Broad-Coverage Biomedical Relation Extraction (COLING 2022)
  ☆17Updated 2 years ago
• youngbin-ro / Multi2OIE
  Multi^2OIE: Multilingual Open Information Extraction Based on Multi-Head Attention with BERT (Findings of ACL: EMNLP 2020)
  ☆56Updated 2 years ago
• dmis-lab / GeNER
  Simple Questions Generate Named Entity Recognition Datasets (EMNLP 2022)
  ☆76Updated 2 years ago
• dmis-lab / ETHIC
  [NAACL 2025] ETHIC: Evaluating Large Language Models on Long-Context Tasks with High Information Coverage
  ☆15Updated 4 months ago
• dmis-lab / KAZU-NER-module
  EMNLP 2022: Biomedical NER for the Enterprise with Distillated BERN2 and the Kazu Framework
  ☆11Updated 9 months ago
• Mihir3009 / In-BoXBART
  In-BoXBART: Get Instructions into Biomedical Multi-task Learning
  ☆14Updated 2 years ago
• Nardien / KALA
  Official Code Repository for the paper "KALA: Knowledge-Augmented Language Model Adaptation" (NAACL 2022)
  ☆35Updated last year
• stefanhgm / patient_summaries_with_llms
  Code for "A Data-Centric Approach To Generate Faithful and High Quality Patient Summaries with Large Language Models"
  ☆14Updated 9 months ago
• cambridgeltl / cometa
  Corpus of Online Medical EnTities: the cometA corpus
  ☆50Updated 3 months ago
• junwoopark92 / mimic-sparql
  "Knowledge Graph-based Question Answering with Electronic Health Records", accepted at Machine Learning for Health Care (MLHC) 2021
  ☆34Updated last year
• xiangyue9607 / CliniRC
  Code for the paper "Clinical Reading Comprehension: A Thorough Analysis of the emrQA Dataset" (ACL 2020)
  ☆17Updated 5 years ago
• Yuanhy1997 / GenBioEL
  Generative Biomedical Entity Linking via Knowledge Base-Guided Pre-training and Synonyms-Aware Fine-tuning [NAACL 2022]
  ☆19Updated 2 years ago
• JHnlp / BioCreative-V-CDR-Corpus
  BioCreative-V CDR Corpus
  ☆27Updated 6 years ago
• qingyu-qc / gpt_bionlp_benchmark
  ☆25Updated last year
• dmis-lab / ChroKnowledge
  [ICLR 2025] ChroKnowledge: Unveiling Chronological Knowledge of Language Models in Multiple Domains
  ☆16Updated 3 months ago
• j6mes / acl2021-factual-error-correction
  ACL 2021
  ☆26Updated 3 years ago
• whaleloops / KEPT
  auto icd coding with prompt
  ☆49Updated last year
• GanjinZero / KeBioLM
  Improving Biomedical Pretrained Language Models with Knowledge [BioNLP 2021]
  ☆65Updated 2 years ago
• salrowili / BioM-Transformers
  BioM-Transformers: Building Large Biomedical Language Models with BERT, ALBERT and ELECTRA
  ☆37Updated last year
• Georgetown-IR-Lab / covid-neural-ir
  ☆24Updated 4 years ago