Data Ingestion and Harmonization
☆46Mar 17, 2026Updated 5 months ago
Alternatives and similar repositories for Data-Ingestion-and-Harmonization
Users that are interested in Data-Ingestion-and-Harmonization are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆17Jun 12, 2026Updated 2 months ago
- OHDSI Ananke - A Tool for Mapping Between OHDSI Concept Identifiers to Unified Medical Language System (UMLS) identifiers☆18Sep 28, 2020Updated 5 years ago
- The repository for code and documentation produced by the N3C Phenotype and Data Acquisition workstream☆66Jul 10, 2025Updated last year
- Pilot model and converter for integration of radiology data into OMOP-CDM☆24Nov 1, 2019Updated 6 years ago
- OMOP2OBO: A Python Library for mapping OMOP standardized clinical terminologies to Open Biomedical Ontologies☆100Oct 3, 2023Updated 2 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Clinical Research Informatics☆13Aug 23, 2023Updated 3 years ago
- ☆20Jul 24, 2026Updated last month
- [under development] Tools for ETL into OMOP CDM and deployment of OHDSI toolstack☆43Nov 10, 2023Updated 2 years ago
- ☆26Feb 3, 2025Updated last year
- Network Embedding All the Things☆19Oct 4, 2022Updated 3 years ago
- The OpenAPI Specification Repository☆12Jul 12, 2023Updated 3 years ago
- CRDC-H model in LinkML, developed by the Center for Cancer Data Harmonization (CCDH)☆18Jan 7, 2022Updated 4 years ago
- Disease Mechanisms KB☆56Updated this week
- Java library to map LOINC-encoded test results to Human Phenotype Ontology☆35Jan 16, 2024Updated 2 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- OMOP v53 on FHIR R4☆17Sep 21, 2023Updated 2 years ago
- Jupyter Notebooks and other code for 4CE data visualizations.☆14Jan 25, 2023Updated 3 years ago
- This is an R package and Java library for rendering parameterized SQL, and translating it to different SQL dialects.☆89Updated this week
- R package to easily interface with OMOP-formatted EHR data.☆38Mar 4, 2020Updated 6 years ago
- ☆10Apr 23, 2025Updated last year
- ☆14Apr 14, 2026Updated 4 months ago
- loinc2hpo Annotation Data☆26Aug 4, 2022Updated 4 years ago
- ☆12Nov 14, 2025Updated 9 months ago
- This repo hosts the API metadata for the Translator project☆15Jun 16, 2026Updated 2 months ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- A tool to help improve data quality standards in observational data science.☆184Updated this week
- Transform the OMOP model to graph model☆28Dec 13, 2024Updated last year
- Medication Extraction and Reconciliation Knowledge Instrument☆13Jun 17, 2026Updated 2 months ago
- Open source clinical text de-identification☆160Aug 20, 2024Updated 2 years ago
- Computational LOINC in OWL.☆19Jul 1, 2026Updated last month
- [in development] Tools to support Natural Language Processing of freetext to create structured data elements for analysis☆37Jan 2, 2024Updated 2 years ago
- A Node.js framework for extracting mCODE FHIR resources☆23Dec 12, 2023Updated 2 years ago
- Runs CQL phenotype definitions against an OMOP repository☆12Apr 14, 2023Updated 3 years ago
- Supporting multi-center research requires combining data created in different data models; this community coordination project aims to pr…☆17Mar 27, 2020Updated 6 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- This project looks at creating a controlled vocabulary for DICOM Pt 6 Data Dictionary with a focus on CS code strings.☆14Jan 9, 2026Updated 7 months ago
- Resources and documentation for UK Biobank to OMOP CDM v5.3.1 conversion☆10Oct 20, 2020Updated 5 years ago
- Collaborative NLP annotation tool supporting enterprise authentication, inter-annotator statistics, active learning☆13Mar 5, 2023Updated 3 years ago
- Model and datasets for schema matching☆15Jul 17, 2021Updated 5 years ago
- ☆29Jul 15, 2023Updated 3 years ago
- The PEDSnet Data Quality Assessment Toolkit (OMOP CDM)☆27Apr 16, 2021Updated 5 years ago
- MIMIC (Medical Information Mart for Intensive Care) is a large, single-center database comprising information relating to patients admitt…☆96Aug 21, 2026Updated last week