Data Ingestion and Harmonization
☆46Mar 17, 2026Updated 2 months ago
Alternatives and similar repositories for Data-Ingestion-and-Harmonization
Users that are interested in Data-Ingestion-and-Harmonization are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Web app and CLI tools for working with biomedical terminologies.☆11Mar 20, 2026Updated last month
- Master Documentation Repository for OHNLP Projects Related to Coronavirus Disease 2019☆21Dec 8, 2022Updated 3 years ago
- OHDSI Ananke - A Tool for Mapping Between OHDSI Concept Identifiers to Unified Medical Language System (UMLS) identifiers☆16Sep 28, 2020Updated 5 years ago
- A python library for calculating semantic similarity between patients in N3C☆14Oct 5, 2022Updated 3 years ago
- OMOP2OBO: A Python Library for mapping OMOP standardized clinical terminologies to Open Biomedical Ontologies☆96Oct 3, 2023Updated 2 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Pilot model and converter for integration of radiology data into OMOP-CDM☆23Nov 1, 2019Updated 6 years ago
- ☆17Apr 22, 2026Updated 3 weeks ago
- [under development] Tools for ETL into OMOP CDM and deployment of OHDSI toolstack☆42Nov 10, 2023Updated 2 years ago
- ☆25Feb 3, 2025Updated last year
- Network Embedding All the Things☆19Oct 4, 2022Updated 3 years ago
- The OpenAPI Specification Repository☆12Jul 12, 2023Updated 2 years ago
- Java library to map LOINC-encoded test results to Human Phenotype Ontology☆34Jan 16, 2024Updated 2 years ago
- OMOP v53 on FHIR R4☆17Sep 21, 2023Updated 2 years ago
- Jupyter Notebooks and other code for 4CE data visualizations.☆13Jan 25, 2023Updated 3 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- ☆14Apr 14, 2026Updated last month
- ☆12Nov 14, 2025Updated 6 months ago
- loinc2hpo Annotation Data☆26Aug 4, 2022Updated 3 years ago
- This repo hosts the API metadata for the Translator project☆15Mar 31, 2026Updated last month
- ☆10Apr 23, 2025Updated last year
- Transform the OMOP model to graph model☆27Dec 13, 2024Updated last year
- Open source clinical text de-identification☆155Aug 20, 2024Updated last year
- Computational LOINC in OWL.☆18Oct 8, 2025Updated 7 months ago
- A Node.js framework for extracting mCODE FHIR resources☆23Dec 12, 2023Updated 2 years ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- [in development] Tools to support Natural Language Processing of freetext to create structured data elements for analysis☆37Jan 2, 2024Updated 2 years ago
- This project looks at creating a controlled vocabulary for DICOM Pt 6 Data Dictionary with a focus on CS code strings.☆12Jan 9, 2026Updated 4 months ago
- Runs CQL phenotype definitions against an OMOP repository☆12Apr 14, 2023Updated 3 years ago
- Resources and documentation for UK Biobank to OMOP CDM v5.3.1 conversion☆10Oct 20, 2020Updated 5 years ago
- Supporting multi-center research requires combining data created in different data models; this community coordination project aims to pr…☆18Mar 27, 2020Updated 6 years ago
- Clinical Language Annotation Modeling and Processing toolkit☆17Oct 10, 2016Updated 9 years ago
- The PEDSnet Data Quality Assessment Toolkit (OMOP CDM)☆27Apr 16, 2021Updated 5 years ago
- Data, notebooks, and articles associated with the RSNA AI Deep Learning Lab at RSNA 2024☆13Dec 4, 2024Updated last year
- Collaborative NLP annotation tool supporting enterprise authentication, inter-annotator statistics, active learning☆14Mar 5, 2023Updated 3 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Workshop: Using R/tidyverse to analyze & visualize gapminder/processed transcriptomics data!☆13Sep 12, 2025Updated 8 months ago
- MIMIC (Medical Information Mart for Intensive Care) is a large, single-center database comprising information relating to patients admitt…☆90Apr 24, 2026Updated 3 weeks ago
- KGX is a Python library for exchanging Knowledge Graphs☆140May 11, 2026Updated last week
- Code for the old version of BioMedICUS, for the new version see the biomedicus3 repository.☆44Mar 13, 2023Updated 3 years ago
- A Claude Skill for connecting to and analyzing personal health records via SMART on FHIR☆66Mar 13, 2026Updated 2 months ago
- ARCH i2b2 PCORnet Ontology☆14May 1, 2019Updated 7 years ago
- ☆22Sep 19, 2024Updated last year