Alternatives and similar repositories for pytorch_ehr

Users that are interested in pytorch_ehr are comparing it to the libraries listed below

• deepmedicine / BEHRT
  Code for BEHRT: Transformer for Electronic Health Records
  ☆110Updated 2 years ago
• MLD3 / FIDDLE
  FlexIble Data-Driven pipeLinE – a preprocessing pipeline that transforms structured EHR data into feature vectors to be used with ML algo…
  ☆93Updated 11 months ago
• lrsoenksen / HAIM
  This repository contains the code to replicate the data processing, modeling and reporting of our Holistic AI in Medicine (HAIM) Publicat…
  ☆122Updated last year
• sajaddarabi / TAPER-EHR
  Patient Code & Text Representation Learning
  ☆20Updated 2 years ago
• nliulab / mimic4ed-benchmark
  Python workflow for generating benchmark datasets and machine learning models from the MIMIC-IV-ED database.
  ☆83Updated 2 years ago
• ZhiGroup / Med-BERT
  Med-BERT, contextualized embedding model for structured EHR data
  ☆286Updated last year
• landiisotta / convae_architecture
  ☆40Updated 3 years ago
• Yuqi92 / deep-patient-representation-mimiciii-multitask
  Implementation of Deep Patient Representation of Clinical Notes at Intensive Care Unit for Multi-Task Prediction
  ☆32Updated 5 years ago
• ratschlab / HIRID-ICU-Benchmark
  Repository for the HiRID ICU Benchmark (HiB) project
  ☆56Updated last year
• rvandewater / YAIB
  🧪Yet Another ICU Benchmark: a holistic framework for the standardization of clinical prediction model experiments. Provide custom datase…
  ☆69Updated this week
• AmsterdamUMC / AmsterdamUMCdb
  AmsterdamUMCdb - Freely Accessible ICU database. Please access our Open Access manuscript at https://doi.org/10.1097/CCM.0000000000004916
  ☆177Updated 4 months ago
• MLD3 / FIDDLE-experiments
  Experiments applying FIDDLE on MIMIC-III and eICU. https://doi.org/10.1093/jamia/ocaa139
  ☆24Updated 2 years ago
• ipolharvard / ethos-paper
  ☆70Updated 2 months ago
• kaggarwal / ClinicalNotesICU
  ☆24Updated 5 years ago
• CogStack / Foresight
  Deep Generative Modelling of Patient Timelines using Electronic Health Records
  ☆62Updated last year
• ratschlab / circEWS
  circEWS public code
  ☆69Updated 7 months ago
• ZhiGroup / CovRNN
  ☆12Updated 3 years ago
• nwams / ClinicalBERT-Deep-Learning--Predicting-Hospital-Readmission-Using-Transformer
  Blog post on Medium
  ☆49Updated 2 years ago
• weimin17 / Multimodal_Transformer
  A Multimodal Transformer: Fusing Clinical Notes With Structured EHR Data for Interpretable In-Hospital Mortality Prediction
  ☆31Updated 2 years ago
• alistairewj / sepsis3-mimic
  Evaluation of the Sepsis-3 guidelines in MIMIC-III
  ☆195Updated 2 years ago
• whaleloops / TransformEHR
  ☆37Updated last year
• MIT-LCP / mimic-iv
  Deprecated. For the latest MIMIC-IV code, please refer to: https://github.com/MIT-LCP/mimic-code
  ☆283Updated 3 years ago
• USM-CHU-FGuyon / BlendedICU
  OMOP standardization pipeline for ICU databases
  ☆41Updated 3 months ago
• healthylaife / MIMIC-IV-Data-Pipeline
  A customizable pipeline for data extraction from MIMIC-IV.
  ☆232Updated last year
• Google-Health / records-research
  ☆222Updated 3 years ago
• cbmi-uthsc / sepsisPrediction
  ☆33Updated 3 years ago
• BorgwardtLab / mgp-tcn
  Sepsis Prediction on MIMIC
  ☆71Updated 3 years ago
• som-shahlab / hf_ehr
  Training HuggingFace models on EHR data
  ☆25Updated this week
• yy6linda / synthetic-ehr-benchmarking
  ☆31Updated 2 years ago
• clinicalml / omop-learn
  Python package for machine learning for healthcare using a OMOP common data model
  ☆108Updated last year