source codes based on PyTorch to analyze EHR
☆149Jan 22, 2024Updated 2 years ago
Alternatives and similar repositories for pytorch_ehr
Users that are interested in pytorch_ehr are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆11Jan 12, 2022Updated 4 years ago
- ☆32Dec 3, 2021Updated 4 years ago
- Code for BEHRT: Transformer for Electronic Health Records☆121Apr 6, 2023Updated 2 years ago
- ☆41Feb 17, 2022Updated 4 years ago
- Graph Convolutional Transformer implemented in pytorch☆14Nov 24, 2020Updated 5 years ago
- NordVPN Special Discount Offer • AdSave on top-rated NordVPN 1 or 2-year plans with secure browsing, privacy protection, and support for for all major platforms.
- MiME Repository☆105Nov 14, 2019Updated 6 years ago
- Patient Code & Text Representation Learning☆19May 22, 2023Updated 2 years ago
- Curated list of awesome papers for electronic health records(EHR) mining, machine learning, and deep learning.☆428Oct 7, 2022Updated 3 years ago
- ☆14Jan 16, 2026Updated 2 months ago
- Folding-Docking-Affinity framework for protein-ligand affinity prediction☆28Mar 20, 2025Updated last year
- Pre-training of Graph Augmented Transformers for Medication Recommendation☆127Jun 15, 2019Updated 6 years ago
- Dual Adversarial Autoencoder for Generating Set-valued Sequences☆19Jan 15, 2021Updated 5 years ago
- ☆49Oct 25, 2023Updated 2 years ago
- A Deep Learning Python Toolkit for Healthcare Applications.☆1,493Updated this week
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Phe2vec: Automated Disease Phenotyping based on Unsupervised Embeddings from Electronic Health Records☆24Nov 20, 2020Updated 5 years ago
- A benchmark for few-shot evaluation of foundation models for electronic health records (EHRs)☆213Jun 6, 2025Updated 9 months ago
- pytorch-retain☆13Nov 20, 2017Updated 8 years ago
- Simple RNN (Gated Recurrent Units) for predicting a diagnosis☆68Jun 25, 2016Updated 9 years ago
- 🧪Yet Another ICU Benchmark: a holistic framework for the standardization of clinical prediction model experiments. Provide custom datase…☆94Mar 13, 2026Updated 2 weeks ago
- Code for "Graph Neural Network on Electronic Health Records for Predicting Alzheimer’s Disease"☆275Sep 13, 2024Updated last year
- Time-Aware Transformer-based Network for Clinical Notes Series Prediction☆24Jan 20, 2024Updated 2 years ago
- python code for BRLTM model☆14Jan 17, 2021Updated 5 years ago
- Self-supervised graph learning with hyperbolic embedding for temporal health event prediction (IEEE Cybernetics)☆15Oct 31, 2020Updated 5 years ago
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- Schema definitions and Python types for Medical Event Data Standard, a standard for medical event data such as EHR and claims data☆103Nov 5, 2025Updated 4 months ago
- Embedding Complexity In the Data Representation Instead of In the Model (arXiv:1802.04233)☆24Feb 14, 2018Updated 8 years ago
- Patient2Vec: A Personalized Interpretable Deep Representation of the Longitudinal Electronic Health Record☆108Nov 27, 2018Updated 7 years ago
- circEWS public code☆76Oct 30, 2024Updated last year
- Data-driven discovery of a novel sepsis pre-shock state predicts impending septic shock in the ICU☆17Jan 23, 2021Updated 5 years ago
- Sample end-to-end pipeline over MIMIC-IV demonstrating the Event Stream GPT code base.☆17Jan 3, 2024Updated 2 years ago
- Reimplementation of RETAIN Recurrent Neural Network in Keras☆85Mar 25, 2023Updated 3 years ago
- ☆229Sep 1, 2021Updated 4 years ago
- A Brief Overview of Causal Inference (xaringan presentation)☆20Aug 14, 2025Updated 7 months ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click and start building anything your business needs.
- MIMIC-Extract:A Data Extraction, Preprocessing, and Representation Pipeline for MIMIC-III☆476Jul 18, 2024Updated last year
- ☆87Mar 8, 2025Updated last year
- ClinicalBERT: Modeling Clinical Notes and Predicting Hospital Readmission (CHIL 2020 Workshop)☆435Oct 17, 2022Updated 3 years ago
- ☆11Jul 31, 2020Updated 5 years ago
- a library for named entity recognition developed by UF HOBI NLP lab featuring SOTA algorithms☆156Sep 13, 2023Updated 2 years ago
- FEMR (Framework for Electronic Medical Records) provides tooling for large-scale, self-supervised learning using electronic health record…☆167Mar 16, 2026Updated last week
- A Deep Dynamic Memory Model for Predictive Medicine☆70May 21, 2018Updated 7 years ago