Repository for the programming laboratory in bioinformatics.
☆64Aug 19, 2026Updated last week
Alternatives and similar repositories for bioinf575
Users that are interested in bioinf575 are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Excel-based Statistics Tool for Analysis, Rapid Significance - in one click☆16Updated this week
- Utility to run RosettaCommons tools☆15May 5, 2026Updated 3 months ago
- Analytical pipeline developed to anlayze Cut and Run data. Inspired by both Henikoff (SEACR) and Orkin (Cut&RunTools) lab pipelines.☆20May 26, 2025Updated last year
- ☆14Aug 5, 2020Updated 6 years ago
- 30 tutorials in Python to get you from a beginner to advanced☆10Jul 3, 2019Updated 7 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- VMD Plugin and associated scripts to build lignin structures from topological specifications☆17Jul 17, 2025Updated last year
- ☆14Feb 28, 2022Updated 4 years ago
- PerturbNet is a deep generative model that can predict the distribution of cell states induced by chemical or genetic perturbation☆66Jan 12, 2026Updated 7 months ago
- Tutorial for running the PredictDB pipeline with GEUVADIS data☆18Jan 22, 2024Updated 2 years ago
- A Molecular cluster tools built on RDKit☆11Dec 22, 2016Updated 9 years ago
- Spectral Gap Optimization of Parameters☆18Mar 28, 2020Updated 6 years ago
- ☆29Mar 24, 2026Updated 5 months ago
- A guide for analyzing single-cell RNA-seq data using the R package Seurat. Go from raw data to cell clustering, identifying cell types, c…☆30Feb 19, 2020Updated 6 years ago
- FragIt main repository☆28Mar 6, 2026Updated 5 months ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- scripts associated with NAFLD-NASH project☆31May 23, 2024Updated 2 years ago
- Examples of applications of pymbar to various problems in simulation and experiment☆24Jan 16, 2015Updated 11 years ago
- Code related to the Celligner manuscript☆46Oct 30, 2020Updated 5 years ago
- A python script to plot an energy level diagram from an input file.☆30Nov 24, 2020Updated 5 years ago
- ☆46Jul 5, 2026Updated last month
- Code for evaluating single cell foundation models scBERT and scGPT☆50Aug 25, 2024Updated 2 years ago
- Python script that receives a molecular dynamics or Monte Carlo trajectory and performs agglomerative clustering to classify similar stru…☆30May 15, 2026Updated 3 months ago
- Tutorial to run AMBER umbrella COM restraint code and derive free energy of transfer profile for methanol through DMPC membrane☆43Apr 27, 2026Updated 4 months ago
- A data pipeline built in Nextflow to process spatial and single-cell experiment data for visualisation in WebAtlas☆71Apr 24, 2026Updated 4 months ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- View and stop running IPython notebook servers☆52Feb 12, 2025Updated last year
- Reweighted Autoencoded Variational Bayes for Enhanced Sampling (RAVE)☆44May 3, 2020Updated 6 years ago
- Semi-supervised learning for peptide identification from shotgun proteomics datasets☆142May 21, 2026Updated 3 months ago
- Repository for all summer program related programs☆49Jul 24, 2026Updated last month
- ☆86Jan 9, 2026Updated 7 months ago
- A collection of cheminformatics scripts that use rdkit☆73Jul 1, 2022Updated 4 years ago
- Quantum Mechanics and Schrodinger Equation Solvers in Python.☆63Jan 3, 2021Updated 5 years ago
- Convert Seurat objects to 10x Genomics Loupe files.☆161Apr 24, 2026Updated 4 months ago
- ☆72Feb 13, 2026Updated 6 months ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- ENCODE Uniform processing pipeline for ChIP-seq☆126Mar 23, 2020Updated 6 years ago
- ☆143Feb 13, 2025Updated last year
- Python application for creating energy profile diagrams as '.svg' files. Extra analysis for catalytic cycle diagrams.☆86May 8, 2021Updated 5 years ago
- Proteomics search & quantification so fast that it feels like magic☆301Jun 5, 2026Updated 2 months ago
- ☆167Apr 13, 2026Updated 4 months ago
- IQmol is an open source molecular editor and visualization package☆108Dec 15, 2022Updated 3 years ago
- A list of software for pangenomics☆198Aug 18, 2026Updated 2 weeks ago