Repository for the programming laboratory in bioinformatics.
☆66Aug 31, 2026Updated 3 weeks ago
Alternatives and similar repositories for bioinf575
Users that are interested in bioinf575 are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- This module includes functions that can be used to simulate mechanochemical phenomena.☆11Nov 16, 2021Updated 4 years ago
- ☆14Aug 5, 2020Updated 6 years ago
- VMD Plugin and associated scripts to build lignin structures from topological specifications☆17Jul 17, 2025Updated last year
- ☆14Feb 28, 2022Updated 4 years ago
- PerturbNet is a deep generative model that can predict the distribution of cell states induced by chemical or genetic perturbation☆69Jan 12, 2026Updated 8 months ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- A Molecular cluster tools built on RDKit☆11Dec 22, 2016Updated 9 years ago
- A Heterogeneous Graph Transformer (HGT)-based model for protein function prediction using biological knowledge graphs and protein languag…☆19Jan 27, 2026Updated 7 months ago
- Spectral Gap Optimization of Parameters☆18Mar 28, 2020Updated 6 years ago
- ☆29Mar 24, 2026Updated 5 months ago
- FragIt main repository☆28Mar 6, 2026Updated 6 months ago
- Reinforcement Learning Fun Game☆20Oct 25, 2019Updated 6 years ago
- DeepGO with Fuzzy DL☆34Sep 19, 2022Updated 4 years ago
- Examples of applications of pymbar to various problems in simulation and experiment☆24Jan 16, 2015Updated 11 years ago
- ☆23Jun 8, 2020Updated 6 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Code related to the Celligner manuscript☆46Oct 30, 2020Updated 5 years ago
- A python script to plot an energy level diagram from an input file.☆30Nov 24, 2020Updated 5 years ago
- Python script that receives a molecular dynamics or Monte Carlo trajectory and performs agglomerative clustering to classify similar stru…☆30May 15, 2026Updated 4 months ago
- Tutorial to run AMBER umbrella COM restraint code and derive free energy of transfer profile for methanol through DMPC membrane☆43Apr 27, 2026Updated 4 months ago
- A data pipeline built in Nextflow to process spatial and single-cell experiment data for visualisation in WebAtlas☆71Apr 24, 2026Updated 4 months ago
- Semi-supervised learning for peptide identification from shotgun proteomics datasets☆143May 21, 2026Updated 4 months ago
- ☆85Jan 9, 2026Updated 8 months ago
- my own studied materials and scripts☆66Jan 20, 2026Updated 8 months ago
- ☆174Dec 20, 2024Updated last year
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- A collection of cheminformatics scripts that use rdkit☆73Jul 1, 2022Updated 4 years ago
- a spatial deconvolution method based on deep learning frameworks, which converts bulk transcriptomes into spatially resolved single-cell …☆140Mar 22, 2023Updated 3 years ago
- SEACR: Sparse Enrichment Analysis for CUT&RUN☆122Jan 15, 2023Updated 3 years ago
- ☆72Feb 13, 2026Updated 7 months ago
- ENCODE Uniform processing pipeline for ChIP-seq☆126Mar 23, 2020Updated 6 years ago
- RaGOO is no longer supported. Please use RagTag instead: https://github.com/malonge/RagTag☆173May 30, 2021Updated 5 years ago
- ☆143Feb 13, 2025Updated last year
- Python application for creating energy profile diagrams as '.svg' files. Extra analysis for catalytic cycle diagrams.☆86May 8, 2021Updated 5 years ago
- Proteomics search & quantification so fast that it feels like magic☆309Updated this week
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- ☆168Apr 13, 2026Updated 5 months ago
- OVO, an open-source ecosystem for de novo protein design☆142Updated this week
- R toolkit for inference, visualization and analysis of cell-cell communication from single-cell and spatially resolved transcriptomics☆671Mar 4, 2026Updated 6 months ago
- Single sample Gene Set Enrichment analysis (ssGSEA) and PTM Enrichment Analysis (PTM-SEA)☆342Feb 10, 2026Updated 7 months ago
- LIANA: a LIgand-receptor ANalysis frAmework☆250Aug 7, 2024Updated 2 years ago
- RNAseq analysis notes from Ming Tang☆1,097Nov 15, 2021Updated 4 years ago
- An ultrafast memory-efficient short read aligner☆267May 11, 2022Updated 4 years ago