daifengwanglab / JAMIE
Joint variational Autoencoders for Multimodal Imputation and Embedding (JAMIE)
☆27Updated 5 months ago
Alternatives and similar repositories for JAMIE:
Users that are interested in JAMIE are comparing it to the libraries listed below
- ☆66Updated 3 months ago
- Multimodal fusion for heterogeneous biomedical data. NeurIPS 2024.☆48Updated 2 months ago
- A Variational Information Bottleneck Approach to Multi-Omics Data Integration☆23Updated 3 years ago
- Multi-stain graph self attention multiple instance learning for histopathology Whole Slide Images - BMVC 2023☆13Updated last week
- ☆15Updated this week
- ☆42Updated 2 months ago
- Cartography of Genomic Interactions Enables Deep Analysis of Single-Cell Expression Data (Nature Communications, 2023)☆15Updated 9 months ago
- ☆15Updated 4 years ago
- ☆17Updated 8 months ago
- ☆54Updated 2 weeks ago
- Multi-task deep learning framework for multi-omics data analysis☆41Updated 2 years ago
- ☆27Updated last year
- Hyper-AdaC: Adaptive clustering-based hypergraph representation of whole slide images for survival analysis☆14Updated 2 years ago
- The first GANs-based omics-to-omics translation framework☆11Updated last year
- This is the official implementation of the method ContIG, for self-supervised learning from medical imaging with genomics☆51Updated 2 years ago
- [NeurIPS 2023] Official codes of "MuSe-GNN: Learning Unified Gene Representation From Multimodal Biological Graph Data"☆27Updated 8 months ago
- SpatialGlue is a novel deep learning methods for spatial multi-omics data integration.☆48Updated 8 months ago
- MOGONET (Multi-Omics Graph cOnvolutional NETworks) is a novel multi-omics data integrative analysis framework for classification tasks in…☆153Updated 3 years ago
- ☆11Updated 2 years ago
- Pytorch implementation for H2GT (ICME 2024)☆14Updated 4 months ago
- Combining Graph Neural Network and Mamba to Capture Local and Global Tissue Spatial Relationships in Whole Slide Images☆19Updated 8 months ago
- PDD: Awesome Phenotypic Drug Discovery☆21Updated this week
- ☆42Updated 11 months ago
- Code to reproduce the multi-omics benchmark study☆8Updated 3 years ago
- Code for the paper: Mixed Models with Multiple Instance Learning☆19Updated 7 months ago
- Single-cell spatial elucidation through image-augmented graph transformer☆31Updated last year
- TISSUE (Transcript Imputation with Spatial Single-cell Uncertainty Estimation) provides tools for estimating well-calibrated uncertainty …☆29Updated 11 months ago
- A deep-learning framework for multi-omics integration☆24Updated last year
- a unified single-cell data integration framework by optimal transport☆34Updated 5 months ago
- Pancancer survival prediction using a deep learning architecture with multimodal representation and integration☆10Updated last year