daifengwanglab / JAMIELinks
Joint variational Autoencoders for Multimodal Imputation and Embedding (JAMIE)
☆28Updated 3 months ago
Alternatives and similar repositories for JAMIE
Users that are interested in JAMIE are comparing it to the libraries listed below
Sorting:
- ☆21Updated 8 months ago
- [ICLR 2025] Stem: Gene Expression Inference from Histology Images☆39Updated 7 months ago
- Multi-task deep learning framework for multi-omics data analysis☆48Updated 3 years ago
- Spatially Resolved Gene Expression Prediction from H&E Histology Images via Bi-modal Contrastive Learning☆80Updated last year
- ☆44Updated last year
- ☆77Updated 6 months ago
- ☆51Updated 3 years ago
- Deep learning on histopathology images.☆136Updated 4 years ago
- Multimodal fusion for heterogeneous biomedical data. NeurIPS 2024.☆88Updated last year
- ☆68Updated last month
- MOGONET (Multi-Omics Graph cOnvolutional NETworks) is a novel multi-omics data integrative analysis framework for classification tasks in…☆172Updated 4 years ago
- A Transformer Model Exploiting Histology Images and Spatial Gene Expression☆22Updated 8 months ago
- ☆49Updated last year
- a unified single-cell data integration framework by optimal transport☆34Updated last year
- Single-cell spatial elucidation through image-augmented graph transformer☆34Updated 2 years ago
- DeepSpot: Leveraging Spatial Context for Enhanced Spatial Transcriptomics Prediction from H&E Images☆61Updated last month
- Python package implementing our method MatchCLOT for multimodal single-cell data integration☆13Updated 2 years ago
- MOMA: A Multi-task Attention Learning Algorithm for Multi-omics Data Interpretation and Classification☆18Updated 2 years ago
- A biologically interpretable graph neural network for multistain computational pathology - CVPR 2025☆25Updated 6 months ago
- ☆74Updated last year
- PyTorch implementation of HisToGene☆45Updated 4 years ago
- Nature machine intelligence-Stable Cox Regression for Survival Analysis under Distribution Shifts☆22Updated 8 months ago
- Experimental evaluation and comparison of multi-omics data integration methods for cancer subtyping☆14Updated 4 years ago
- Her2 Breast Cancer Project☆88Updated 3 years ago
- A novel method named stDiff investigates the potential of employing diffusion models for single-cell omics generation.☆24Updated last year
- MorphoDiff is a diffusion based generative pipeline to predict high-resolution cell morphological responses under different conditions ba…☆28Updated 3 months ago
- A Variational Information Bottleneck Approach to Multi-Omics Data Integration☆24Updated 4 years ago
- A visual–omics foundation model to bridge histopathology with spatial transcriptomics☆111Updated 6 months ago
- Self-supervised representation learning combining GTEx histology, RNA-seq and WGS☆31Updated 8 months ago
- Identify spatial domain☆86Updated 6 months ago