daifengwanglab / JAMIELinks
Joint variational Autoencoders for Multimodal Imputation and Embedding (JAMIE)
☆28Updated 5 months ago
Alternatives and similar repositories for JAMIE
Users that are interested in JAMIE are comparing it to the libraries listed below
Sorting:
- ☆42Updated 8 months ago
- Multi-task deep learning framework for multi-omics data analysis☆48Updated 3 years ago
- ☆19Updated 4 months ago
- Multimodal fusion for heterogeneous biomedical data. NeurIPS 2024.☆71Updated 8 months ago
- MOGONET (Multi-Omics Graph cOnvolutional NETworks) is a novel multi-omics data integrative analysis framework for classification tasks in …☆171Updated 4 years ago
- [ICLR 2025] Stem: Gene Expression Inference from Histology Images☆37Updated 4 months ago
- Python package implementing our method MatchCLOT for multimodal single-cell data integration☆13Updated 2 years ago
- ☆47Updated last year
- a unified single-cell data integration framework by optimal transport☆35Updated 10 months ago
- Identify spatial domain☆79Updated 3 months ago
- Spatially Resolved Gene Expression Prediction from H&E Histology Images via Bi-modal Contrastive Learning☆81Updated 10 months ago
- MorphoDiff is a diffusion based generative pipeline to predict high-resolution cell morphological responses under different conditions ba…☆21Updated 2 weeks ago
- ☆46Updated 3 years ago
- Multi-stain graph self attention multiple instance learning for histopathology Whole Slide Images - BMVC 2023☆14Updated 6 months ago
- Single-cell spatial elucidation through image-augmented graph transformer☆33Updated 2 years ago
- ☆48Updated last month
- Deep learning on histopathology images.☆128Updated 3 years ago
- A Transformer Model Exploiting Histology Images and Spatial Gene Expression☆21Updated 5 months ago
- ☆16Updated last week
- A novel method named stDiff investigates the potential of employing diffusion models for single-cell omics generation.☆22Updated last year
- TISSUE (Transcript Imputation with Spatial Single-cell Uncertainty Estimation) provides tools for estimating well-calibrated uncertainty …☆31Updated last year
- Experimental evaluation and comparison of multi-omics data integration methods for cancer subtyping☆14Updated 4 years ago
- A Variational Information Bottleneck Approach to Multi-Omics Data Integration☆24Updated 4 years ago
- ☆55Updated 2 years ago
- ☆73Updated 9 months ago
- ☆72Updated 3 months ago
- ☆56Updated last year
- Dependency-aware deep generative models for multitasking analysis of spatial genomics data☆35Updated last year
- conST: an interpretable multi-modal contrastive learning framework for spatial transcriptomics☆28Updated last year
- Cartography of Genomic Interactions Enables Deep Analysis of Single-Cell Expression Data (Nature Communications, 2023)☆19Updated last year