HealthML / ContIG
This is the official implementation of the method ContIG, for self-supervised learning from medical imaging with genomics
☆51Updated 2 years ago
Alternatives and similar repositories for ContIG:
Users that are interested in ContIG are comparing it to the libraries listed below
- ☆30Updated last year
- ☆29Updated 3 years ago
- Learning domain-agnostic visual representation for computational pathology using medically-irrelevant style transfer augmentation☆24Updated 4 years ago
- Official Code Release for "Adapting Pre-trained Vision Transformers from 2D to 3D through Weight Inflation Improves Medical Image Segment…☆45Updated last year
- Transparent medical image AI via an image–text foundation model grounded in medical literature☆59Updated 2 months ago
- ☆17Updated last month
- CoNIC Challenge☆63Updated last year
- [Nature Machine Intelligence 2024] Code and evaluation repository for the paper☆97Updated 2 weeks ago
- [MICCAI 2023 Oral] The official code of "Pathology-and-genomics Multimodal Transformer for Survival Outcome Prediction" (top 9%)☆87Updated 4 months ago
- Hetero-Modal Variational Encoder-Decoder for Joint Modality Completion and Segmentation☆36Updated last year
- Visual Language Pretrained Multiple Instance Zero-Shot Transfer for Histopathology Images - CVPR 2023☆99Updated last year
- ☆44Updated last year
- A graph-transformer for whole slide image classification☆158Updated 8 months ago
- ☆21Updated 3 weeks ago
- The source code of 'Diagnose Like A Pathologist: Weakly-Supervised Pathologist-Tree Network for Slide-Level Immunohistochemical Scoring' …☆24Updated 3 years ago
- This is the pytorch\DGL implementation of the AMIGO paper.☆11Updated last year
- Code and data for MICCAI 2022 accepted paper: Survival Prediction of Brain Cancer with Incomplete Radiology, Pathology, Genomics, and Dem…☆18Updated 11 months ago
- Training foundational medical imaging models using multi-task learning.☆22Updated 2 weeks ago
- Official PyTorch Implementation for DiRA: Discriminative, Restorative, and Adversarial Learning for Self-supervised Medical Image Analysi…☆101Updated 10 months ago
- Repository for the Universal Lesion Segmentation Challenge '23☆30Updated 2 months ago
- Dataset of 9536 H&E-stained patches for colorectal polyps classification and adenomas grading | ICIP21 https://doi.org/10.1109/ICIP42928.…☆33Updated last year
- Evaluating DINOv2 for Radiology☆48Updated last year
- [MICCAI'23] HIGT: Hierarchical Interaction Graph-Transformer for Whole Slide Image Analysis☆32Updated 5 months ago
- [ECCV2022&TPAMI] Official pytorch implementation of UniMiSS & UniMiSS+☆62Updated 3 months ago
- MICCAI 2021 Code for the paper: Ultrasound Video Transformers for Cardiac Ejection Fraction Estimation☆36Updated 3 years ago
- ☆16Updated last month
- Deep learning enabled assessment of cardiac allograft rejection from endomyocardial biopsies- Nature Medicine☆30Updated 2 years ago
- The medical imaging meta-learning toolbox allows to build models that learn to learn in a setting with diverse tasks. It also provides co…☆39Updated 9 months ago
- A collection of self-supervised papers in medical imaging.☆39Updated 3 years ago