anand-subu / blog_resources
A repository of all code and resources of my published blog articles.
☆15Updated last week
Related projects: ⓘ
- An application to interact with your FHIR API's using natural language query☆11Updated last year
- Code repository for "Generative Large Language Models are Poor Medical Coders: A Benchmarking Analysis of Medical Code Querying"☆12Updated this week
- Winners of the SNOMED CT Entity Linking Challenge☆24Updated 5 months ago
- An exploratory, tutorial and analytical view of the Unified Medical Language System (UMLS) & the software/technologies provided via being…☆32Updated 6 months ago
- Runtime repository for the SNOMED CT Entity Linking challenge on DrivenData☆14Updated 6 months ago
- Python package for managing OHDSI clinical data models. Includes support for LLM based plain text queries!☆36Updated last week
- Estimate similarity of medical concepts based on Unified Medical Language System (UMLS)☆15Updated 2 years ago
- Hephaestus - ETL and ML tools for OHDSI - OMOP CDM☆13Updated last year
- Vocabulary lookup tool for LLMs (and humans)☆12Updated last year
- FHIR Ontop OMOP Implementation☆14Updated 4 months ago
- Work on using Retrieval-Augmented Generation (RAG) to combine Fast Healthcare Interoperable Resources (FHIR) with Generative AI.☆76Updated 5 months ago
- UMLS Graph database for semantic queries☆19Updated last year
- python library for graphical and continuous representations of ICD9 and ICD10 codes☆34Updated 8 months ago
- A simple python library for ICD-10-CM codes☆52Updated 6 months ago
- Unlocking the Power of Health Data With a Modern Data Lakehouse☆17Updated 8 months ago
- FHIR to pandas dataframe for data analytics, AI and ML!☆32Updated this week
- Build a medical knowledge graph based on Unified Language Medical System (UMLS)☆17Updated 2 years ago
- [under development] ETL materials to support proposal for CDM enhancements for clinical trial data☆20Updated 3 years ago
- The project hosts the data, methods and tools about Computer-Assisted Coding of ICD-11 in medical coding scenes.☆10Updated 4 years ago
- ☆17Updated 2 months ago
- A comprehensive NLP preprocessing package for clinical notes sentence boundary detection, tokenization☆26Updated 3 months ago
- This project is designed for a simple LLM agent with tools on a clinical knowledge graph in Neo4j.☆15Updated last month
- LLM Embeddings for ICD 10 Data☆33Updated 5 months ago
- FHIR to OMOP using PySpark on AWS Glue☆12Updated 3 years ago
- ☆15Updated last week
- A small python package that allows the user to look up common medical abbreviations.☆12Updated 2 years ago
- BioDEX: Large-Scale Biomedical Adverse Drug Event Extraction for Real-World Pharmacovigilance.☆42Updated 7 months ago
- General tutorials for the setup and use of MedCAT.☆30Updated this week
- Conversion from FHIR HL7 to OMOP CDM☆15Updated 3 years ago
- Sentence tokenizer for clinical/medical text.☆25Updated 3 months ago