TARDIS: Topological Algorithms for Robust DIscovery of Singularities
☆45Aug 7, 2026Updated 2 months ago
Alternatives and similar repositories for TARDIS
Users that are interested in TARDIS are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Maximum mean discrepancy comparisons for single cell profiling experiments☆20Feb 9, 2022Updated 4 years ago
- A quantitative framework for evaluating data structure preservation by dimensionality reduction techniques☆16Jun 1, 2021Updated 5 years ago
- A topological machine learning framework based on PyTorch☆216Feb 11, 2026Updated 8 months ago
- Systematically learn and evaluate the latent geometry of high-dimensional data, with a focus on scRNAseq analysis☆108Oct 4, 2026Updated last week
- ☆16Aug 7, 2023Updated 3 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- CellDrift: temporal perturbation effects for single cell data☆14Dec 3, 2022Updated 3 years ago
- ☆16Nov 24, 2023Updated 2 years ago
- GPI-Space: Memory Driven Computing and Big Data☆10Mar 17, 2026Updated 6 months ago
- ☆12Sep 7, 2020Updated 6 years ago
- Altered TCR Ligand Affinities and Structures☆13Dec 1, 2023Updated 2 years ago
- ☆19Oct 26, 2021Updated 4 years ago
- Snakemake workflow to benchmark scRNA-seq data simulators☆15Aug 10, 2022Updated 4 years ago
- Syllabi, handouts, and sketches for my creative coding course, 2D Animation and Interaction☆21Oct 19, 2021Updated 4 years ago
- ☆183Sep 13, 2023Updated 3 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Library for working with simplicial and cubical complexes☆10Dec 29, 2024Updated last year
- ☆11Dec 8, 2023Updated 2 years ago
- Scripts for reproducing analyses of large RNA-seq datasets☆15May 22, 2019Updated 7 years ago
- Graph-based Decoding for In Situ Sequencing☆10Jul 2, 2020Updated 6 years ago
- Convert TCR gene names☆15Dec 26, 2025Updated 9 months ago
- An R package for correcting p-values for multiple hypothesis testing in comparative quantitative omics experiments using permutation-base…☆13Mar 11, 2026Updated 7 months ago
- C++ implementation of the Diffusion Map, with Python bindings☆10Aug 22, 2017Updated 9 years ago
- Official code for Conformal Isometry of Lie Group Representation in Recurrent Network of Grid Cells (NeurIPS workshop on Symmetry and Geo…☆13Nov 1, 2022Updated 3 years ago
- IMSEQ - IMmunogenetic SEQuence Analysis☆15Aug 10, 2018Updated 8 years ago
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- ☆29Sep 4, 2023Updated 3 years ago
- ☆12Aug 21, 2020Updated 6 years ago
- Data point cloud separability analysis based on linear Fisher discriminants☆10Nov 22, 2019Updated 6 years ago
- hybrid computing engine executed by both GPU and multicore to accelerate PH matrix reduction☆13Dec 2, 2019Updated 6 years ago
- This code accompanies our paper "A fractal dimension for measures via persistent homology"☆10Jan 15, 2019Updated 7 years ago
- Bioinformatics 2020: FastSK: Fast and Accurate Sequence Classification by making gkm-svm faster and scalable. https://fastsk.readthedocs.…☆21Dec 8, 2022Updated 3 years ago
- A GUI tool for easy and smooth visualisation and analysis of Spatial Transcriptomics datasets☆11Mar 4, 2025Updated last year
- A data analysis package for high-dimensional, multi-block data.☆13Jan 13, 2022Updated 4 years ago
- Code and Data Availability for Single cell transcriptomics reveals a signaling roadmap coordinating endoderm and mesoderm lineage diversi…☆10Apr 16, 2020Updated 6 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Dynamical information enables inference of gene regulation at single-cell scale☆12Jun 9, 2025Updated last year
- A simple implementation of UMAP, TSNE and GDR across frameworks and libraries☆14Dec 10, 2024Updated last year
- Reference data for cell-type assignment with clustifyr☆13Nov 3, 2022Updated 3 years ago
- Code to implement the hierarchical cross-entropy loss for single-cell annotation models☆24Jul 17, 2026Updated 2 months ago
- ☆44Jan 12, 2026Updated 8 months ago
- Tool for IDentification and Enumeration of Spliced and Unspliced Read Fragments☆18Aug 24, 2026Updated last month
- Handling of structural neuroimaging file formats for Julia. FreeSurfer MGH, NIfTI, surf, annot, label, etc.☆13Sep 16, 2026Updated 3 weeks ago