TARDIS: Topological Algorithms for Robust DIscovery of Singularities
☆44Jul 28, 2023Updated 2 years ago
Alternatives and similar repositories for TARDIS
Users that are interested in TARDIS are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A quantitative framework for evaluating data structure preservation by dimensionality reduction techniques☆16Jun 1, 2021Updated 5 years ago
- A topological machine learning framework based on PyTorch☆212Feb 11, 2026Updated 4 months ago
- Systematically learn and evaluate the latent geometry of high-dimensional data, with a focus on scRNAseq analysis☆107Apr 1, 2026Updated 3 months ago
- Information-based dimensionality reduction☆30Dec 14, 2024Updated last year
- ☆15Aug 7, 2023Updated 2 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- CellDrift: temporal perturbation effects for single cell data☆13Dec 3, 2022Updated 3 years ago
- ☆16Nov 24, 2023Updated 2 years ago
- Snakemake workflow to benchmark scRNA-seq data simulators☆14Aug 10, 2022Updated 3 years ago
- Altered TCR Ligand Affinities and Structures☆12Dec 1, 2023Updated 2 years ago
- ☆11Sep 7, 2020Updated 5 years ago
- ☆29Sep 4, 2023Updated 2 years ago
- ☆19Oct 26, 2021Updated 4 years ago
- Class of data structures that can be unfolded.☆22Jan 6, 2026Updated 5 months ago
- ☆11Dec 8, 2023Updated 2 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Library for working with simplicial and cubical complexes☆10Dec 29, 2024Updated last year
- Scripts for reproducing analyses of large RNA-seq datasets☆15May 22, 2019Updated 7 years ago
- Software demonstrations for a course on Topological Data Analysis.☆12Mar 26, 2021Updated 5 years ago
- An R package for correcting p-values for multiple hypothesis testing in comparative quantitative omics experiments using permutation-base…☆12Mar 11, 2026Updated 3 months ago
- Graph-based Decoding for In Situ Sequencing☆10Jul 2, 2020Updated 6 years ago
- IMSEQ - IMmunogenetic SEQuence Analysis☆15Aug 10, 2018Updated 7 years ago
- Official Code Repository for the paper "Key-value memory in the brain"☆32Feb 25, 2025Updated last year
- C++ implementation of the Diffusion Map, with Python bindings☆10Aug 22, 2017Updated 8 years ago
- Official code for Conformal Isometry of Lie Group Representation in Recurrent Network of Grid Cells (NeurIPS workshop on Symmetry and Geo…☆12Nov 1, 2022Updated 3 years ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- ☆12Feb 14, 2022Updated 4 years ago
- hybrid computing engine executed by both GPU and multicore to accelerate PH matrix reduction☆13Dec 2, 2019Updated 6 years ago
- Bioinformatics 2020: FastSK: Fast and Accurate Sequence Classification by making gkm-svm faster and scalable. https://fastsk.readthedocs.…☆21Dec 8, 2022Updated 3 years ago
- Generate amazing umap network graphs☆11Mar 16, 2021Updated 5 years ago
- Time-series topology data analysis tool suite (TS-TOP) and datasets for characterizing and classifying time-series data☆40Aug 10, 2016Updated 9 years ago
- AllenDigger, a tool for spatial expression data visualization, spatial heterogeneity delineation and single cell registration based on Al…☆14Apr 2, 2023Updated 3 years ago
- Code and Data Availability for Single cell transcriptomics reveals a signaling roadmap coordinating endoderm and mesoderm lineage diversi…☆10Apr 16, 2020Updated 6 years ago
- Reference data for cell-type assignment with clustifyr☆13Nov 3, 2022Updated 3 years ago
- A simple implementation of UMAP, TSNE and GDR across frameworks and libraries☆13Dec 10, 2024Updated last year
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- ☆43Jan 12, 2026Updated 5 months ago
- Handling of structural neuroimaging file formats for Julia.☆13Feb 18, 2026Updated 4 months ago
- Variational Estimation of Latent Velocity from Expression with Time-resolution☆13May 30, 2024Updated 2 years ago
- ☆18Nov 18, 2025Updated 7 months ago
- 𝒫robabilistic modeling of RNA velocity ⬱☆49Jun 23, 2026Updated last week
- pCMF R package☆14Apr 16, 2019Updated 7 years ago
- Zero-inflated mixture model for single-cell data.☆14Feb 16, 2016Updated 10 years ago