TARDIS: Topological Algorithms for Robust DIscovery of Singularities
☆44Jul 28, 2023Updated 2 years ago
Alternatives and similar repositories for TARDIS
Users that are interested in TARDIS are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Maximum mean discrepancy comparisons for single cell profiling experiments☆20Feb 9, 2022Updated 4 years ago
- A quantitative framework for evaluating data structure preservation by dimensionality reduction techniques☆16Jun 1, 2021Updated 5 years ago
- A topological machine learning framework based on PyTorch☆210Feb 11, 2026Updated 4 months ago
- Systematically learn and evaluate the latent geometry of high-dimensional data, with a focus on scRNAseq analysis☆106Apr 1, 2026Updated 2 months ago
- ☆14Aug 7, 2023Updated 2 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- CellDrift: temporal perturbation effects for single cell data☆13Dec 3, 2022Updated 3 years ago
- ☆16Nov 24, 2023Updated 2 years ago
- GPI-Space: Memory Driven Computing and Big Data☆10Mar 17, 2026Updated 2 months ago
- Snakemake workflow to benchmark scRNA-seq data simulators☆14Aug 10, 2022Updated 3 years ago
- Altered TCR Ligand Affinities and Structures☆12Dec 1, 2023Updated 2 years ago
- ☆182Sep 13, 2023Updated 2 years ago
- ☆11Dec 8, 2023Updated 2 years ago
- Scripts for reproducing analyses of large RNA-seq datasets☆15May 22, 2019Updated 7 years ago
- An R package for correcting p-values for multiple hypothesis testing in comparative quantitative omics experiments using permutation-base…☆12Mar 11, 2026Updated 3 months ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Graph-based Decoding for In Situ Sequencing☆10Jul 2, 2020Updated 5 years ago
- IMSEQ - IMmunogenetic SEQuence Analysis☆15Aug 10, 2018Updated 7 years ago
- Official Code Repository for the paper "Key-value memory in the brain"☆32Feb 25, 2025Updated last year
- Official code for Conformal Isometry of Lie Group Representation in Recurrent Network of Grid Cells (NeurIPS workshop on Symmetry and Geo…☆12Nov 1, 2022Updated 3 years ago
- ☆12Aug 21, 2020Updated 5 years ago
- ☆12Feb 14, 2022Updated 4 years ago
- licensed under itself☆12Apr 1, 2016Updated 10 years ago
- Bioinformatics 2020: FastSK: Fast and Accurate Sequence Classification by making gkm-svm faster and scalable. https://fastsk.readthedocs.…☆21Dec 8, 2022Updated 3 years ago
- Convert TCR gene names☆15Dec 26, 2025Updated 5 months ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Generate amazing umap network graphs☆11Mar 16, 2021Updated 5 years ago
- Dynamical information enables inference of gene regulation at single-cell scale☆12Jun 9, 2025Updated last year
- Code and Data Availability for Single cell transcriptomics reveals a signaling roadmap coordinating endoderm and mesoderm lineage diversi…☆10Apr 16, 2020Updated 6 years ago
- A simple implementation of UMAP, TSNE and GDR across frameworks and libraries☆13Dec 10, 2024Updated last year
- Handling of structural neuroimaging file formats for Julia.☆13Feb 18, 2026Updated 3 months ago
- Variational Estimation of Latent Velocity from Expression with Time-resolution☆13May 30, 2024Updated 2 years ago
- a little library to help me with things involving Koopman operators☆12Mar 3, 2022Updated 4 years ago
- 𝒫robabilistic modeling of RNA velocity ⬱☆49May 24, 2026Updated 2 weeks ago
- Zero-inflated mixture model for single-cell data.☆14Feb 16, 2016Updated 10 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- A GUI tool for easy and smooth visualisation and analysis of Spatial Transcriptomics datasets☆11Mar 4, 2025Updated last year
- Constrained LUmping of differential Equations☆13Sep 12, 2024Updated last year
- Matthews Correlation Coefficient Loss implementation for image segmentation.☆12Mar 19, 2026Updated 2 months ago
- ☆18Sep 26, 2023Updated 2 years ago
- generalized principal component analysis (GLM-PCA) implemented in python☆64Feb 1, 2021Updated 5 years ago
- ☆10Apr 24, 2024Updated 2 years ago
- Integrating temporal gene expression modalities for trajectory inference and disease prediction☆10Sep 20, 2022Updated 3 years ago