chenlabgccri / CancerTypePrediction
This is the repository for paper titled as "Convolutional neural network models for cancer type prediction based on gene expression".
☆51Updated 5 years ago
Alternatives and similar repositories for CancerTypePrediction:
Users that are interested in CancerTypePrediction are comparing it to the libraries listed below
- OncoNetExplainer: Explainable Prediction of Cancer Types Based on Gene Expression Data☆11Updated 2 years ago
- DCAP:Integrating multi-omics data with deep learning for predicting cancer prognosis☆21Updated 4 years ago
- Pathway-based sparse deep neural network for survival analysis☆38Updated last year
- Code to reproduce results in Ravindra NG* & Sehanobish A* et al. 2020, "Disease State Prediction From Single-Cell Data Using Graph Attent…☆16Updated 4 years ago
- using shallow neural network layer (embedding) to infer gene-gene/sample relationship from gene expression data☆21Updated 6 years ago
- A Snapshot Neural Ensemble Method for Cancer Type Prediction Based on Copy Number Variations☆20Updated 2 years ago
- Deep learning methods for feature selection in gene expression autism data.☆36Updated 2 years ago
- HiGCN: a hierarchical graph convolution network for representation learning of gene expression data☆11Updated 4 years ago
- Multi-task deep learning framework for multi-omics data analysis☆45Updated 2 years ago
- Here, we describe the comparison of the most used algorithms in classical ML and DL to classify carcinogenic tumors described on 11_tumor…☆10Updated 5 years ago
- SALMON: Survival Analysis Learning with Multi-Omics Neural Networks☆67Updated 5 months ago
- This is the repository for paper titled as "Convolutional neural network models for cancer type prediction based on gene expression".☆12Updated 4 years ago
- ☆14Updated last year
- ☆23Updated 4 years ago
- Deep-Learning framework for multi-omic and survival data integration☆82Updated last year
- Cancer Drug Response prediction using a Recommender System☆42Updated last year
- End-to-end deep learning model for low dimensional latent space extraction and multi-class classification on multi-omics datasets.☆34Updated 3 years ago
- ☆42Updated 4 months ago
- Deep Learning Based Tumor Type Classification Using Gene Expression Data☆22Updated 7 months ago
- ☆19Updated 4 years ago
- This repository contains code used to build and interpret a deep learning model. It is a DNN classifier trained using gene expression dat…☆9Updated 3 years ago
- ☆34Updated 3 years ago
- Interpretable convolutional neural networks on multi-omics data predict long-term survival in glioblastoma☆15Updated last year
- ☆9Updated 5 years ago
- Deep Learning with Multimodal Representation for Pancancer Prognosis Prediction☆86Updated 6 years ago
- A deep-learning framework for multi-omics integration☆25Updated last year
- Graph Neural Network model for survival analysis from multi-omics data☆12Updated 3 years ago
- using graph convolutional neural network and spaital transcriptomics data to infer cell-cell interactions☆56Updated 3 years ago
- TCGA Benchmark Tasks for Clinical Attribute Prediction based on Genome☆13Updated 4 years ago
- ☆19Updated 4 years ago