browning-lab / ukb-phasing
A pipeline for phasing UK Biobank whole genome sequence data
☆18Updated 2 years ago
Alternatives and similar repositories for ukb-phasing:
Users that are interested in ukb-phasing are comparing it to the libraries listed below
- An R package for performing MetaSTAAR procedure in whole-genome sequencing studies☆22Updated 4 months ago
- ☆13Updated 2 years ago
- A pure R implementation of locuszoom for plotting genetic data at genomic loci accompanied by gene annotations.☆41Updated 3 weeks ago
- Software to perform multi-ancestry SNP fine-mapping on molecular data☆19Updated 5 months ago
- ☆25Updated 11 months ago
- Analysis of gene expression and splicing diversity in a subset of samples from the 1000 Genomes Project, including eQTL and sQTL discover…☆36Updated 8 months ago
- ☆20Updated 2 years ago
- A comprehensive pipeline for post-GWAS analysis leveraging diverse types of omics data☆28Updated 2 years ago
- Using real genotype data, simulate a complex trait as a function of latent expression, fit eQTL weights in independent data, and perform …☆26Updated last year
- A Fine-Mapping pipeline☆19Updated 5 years ago
- Mediated Expression Score Regression (MESC)☆26Updated 2 years ago
- Quality control steps for GWAS☆19Updated last year
- Suite of heritability and genetic correlation estimation tools for exome-sequencing data☆33Updated last month
- QTL Discovery using Annotations☆24Updated 2 years ago
- Cross-population fine-mapping☆34Updated 3 months ago
- Fine-mapping with infinitesimal effects☆15Updated last year
- ☆40Updated 6 months ago
- ☆18Updated last year
- A repository containing various scripts useful for performing quality control on data from genome-wide association studies and visualizin…☆20Updated 7 years ago
- A flexible R package for weighted principal component case control matching☆10Updated last year
- Code supporting analyses in paper on fine-mapping AD loci☆15Updated 3 years ago
- An R package for creating mirrored Manhattan plots☆18Updated 2 years ago
- Every Gene Ever Annotated in published GWAS☆47Updated 2 years ago
- The tutorial for performing single-/multi-trait association analysis of whole-genome/whole-exome sequencing (WGS/WES) studies using FAVOR…☆28Updated 3 months ago
- A tool to plot significant regions of GWAS☆29Updated 2 years ago
- ☆22Updated last year
- R package to perform Bayesian Genome-Wide Association Studies☆39Updated last year
- SparsePainter: fast, accurate and fine-scale chromosome painting software based on PBWT and HashMap☆12Updated last week
- ☆21Updated 2 months ago
- Repository for resources we'd like to share with the community.☆24Updated 2 years ago