browning-lab / ukb-phasingLinks
A pipeline for phasing UK Biobank whole genome sequence data
☆19Updated 2 years ago
Alternatives and similar repositories for ukb-phasing
Users that are interested in ukb-phasing are comparing it to the libraries listed below
Sorting:
- An R package for performing MetaSTAAR procedure in whole-genome sequencing studies☆27Updated last year
- Software to perform multi-ancestry SNP fine-mapping on molecular data☆29Updated last month
- Cross-population fine-mapping☆41Updated last year
- Analysis of gene expression and splicing diversity in a subset of samples from the 1000 Genomes Project, including eQTL and sQTL discover…☆42Updated last year
- Pan-transcriptomic phenotyping☆18Updated 2 months ago
- A pure R implementation of locuszoom for plotting genetic data at genomic loci accompanied by gene annotations.☆52Updated 10 months ago
- Using real genotype data, simulate a complex trait as a function of latent expression, fit eQTL weights in independent data, and perform …☆29Updated 2 years ago
- An R package for fast and efficient visualizing of GWAS results using Q-Q and Manhattan plots directly from PLINK output files.☆39Updated 3 months ago
- Notebooks and scripts for reproducing analyses and figures from the V8 GTEx Consortium paper☆44Updated last year
- QTL Discovery using Annotations☆28Updated 3 years ago
- Fine-mapping with infinitesimal effects☆20Updated 7 months ago
- A Fine-Mapping pipeline☆22Updated 6 years ago
- A comprehensive pipeline for post-GWAS analysis leveraging diverse types of omics data☆29Updated 3 years ago
- ☆13Updated 2 years ago
- R package to perform Bayesian Genome-Wide Association Studies☆41Updated 2 years ago
- causal TWAS (cTWAS)☆47Updated last month
- Statistical tools for Quantitative Genetic Analyses☆38Updated last month
- A repository containing various scripts useful for performing quality control on data from genome-wide association studies and visualizin…☆20Updated 8 years ago
- ☆22Updated 2 years ago
- Suite of heritability and genetic correlation estimation tools for exome-sequencing data☆35Updated last month
- ☆23Updated this week
- ☆31Updated 6 months ago
- ☆49Updated 6 months ago
- Quality control steps for GWAS☆26Updated 2 years ago
- Mediated Expression Score Regression (MESC)☆27Updated 2 months ago
- Generalized linear Mixed Model Association Tests☆44Updated last month
- PCA for hidden variable inference in QTL mapping: an R package and tutorial☆20Updated 2 years ago
- A tool to plot significant regions of GWAS☆29Updated 2 years ago
- Non-parametric, asymptotic P-value computation for multivariate linear models☆16Updated 2 years ago
- ☆63Updated 4 years ago