cryo-ET workflow
☆10Jun 2, 2026Updated 3 weeks ago
Alternatives and similar repositories for opusTomo
Users that are interested in opusTomo are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Complementary tools for Relion tomo☆12Mar 9, 2024Updated 2 years ago
- Miscellaneous scripts for processing cryo-ET data☆22Feb 25, 2025Updated last year
- A CTF Simulation Web App☆13May 11, 2026Updated last month
- automated on-the-fly tilt-series alignment☆11Jul 6, 2021Updated 4 years ago
- TomoNet is a GUI based pipeline package focusing on cryoET and STA data processing☆22Mar 12, 2026Updated 3 months ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Detect and erase gold fiducials in cryo-EM images☆16May 27, 2025Updated last year
- a bidirectional interface between Dynamo and the Warp-RELION-M pipeline☆20Jul 28, 2023Updated 2 years ago
- ☆26May 19, 2026Updated last month
- TomoBEAR is a configurable and customizable modular pipeline for streamlined processing of cryo-electron tomographic data for subtomogram…☆29Jun 29, 2025Updated last year
- IsoNet at higher resolution☆37Updated this week
- ☆10Jun 9, 2026Updated 2 weeks ago
- ☆23Nov 15, 2025Updated 7 months ago
- STOPGAP is a MATLAB-based package for subtomogram averaging.☆38Jun 5, 2026Updated 3 weeks ago
- Contextual Analysis Tools for cryoET and subtomogram averaging☆38Jun 20, 2026Updated last week
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Very simple script for EPU users which adds beam tilt classes to the star file☆11Nov 3, 2023Updated 2 years ago
- a tool for using surfaces to explore volumetric data in napari☆20Jun 13, 2026Updated 2 weeks ago
- Rapidly simulate realistic cryo-EM particles☆18May 18, 2023Updated 3 years ago
- Self-supervised deep learning for denoising and missing wedge reconstruction of cryo-ET tomograms☆55Jul 29, 2025Updated 11 months ago
- GPU accelerating computing for Bayesian inference of electron microscopy images. BioEM is a publicly available software that enables the …☆12Apr 7, 2023Updated 3 years ago
- SerialEM mdoc files as pandas dataframes☆14Feb 4, 2026Updated 4 months ago
- A curated list of awesome computational cryo-ET methods.☆70Nov 23, 2025Updated 7 months ago
- Python scripts to manipulate Relion tomo STAR files and much more...☆15Mar 23, 2026Updated 3 months ago
- PyTom software for cryo-tomogram processing☆45Jan 5, 2026Updated 5 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- RELION external reconstruct functionality☆12Sep 11, 2020Updated 5 years ago
- simplify the handling of large sets of Euler angles in Python☆32Feb 1, 2022Updated 4 years ago
- OPUS-SSRI☆13Dec 21, 2022Updated 3 years ago
- Makes RELION 3.1 Optics Groups from EPU AFIS data☆18May 8, 2023Updated 3 years ago
- Tool for reconstruction and analysis of continuous heterogeneity of a cryo-EM dataset☆34Sep 18, 2025Updated 9 months ago
- Python tool for visualising and interacting with cryo-ET and subtomogram averaging data.☆30May 1, 2026Updated last month
- A somewhat cleaned-up version of the TOM toolbox for electron tomography☆16Nov 26, 2016Updated 9 years ago
- Python scripts for easy RELION STAR file manipulation.☆26Mar 24, 2026Updated 3 months ago
- ☆12Apr 4, 2023Updated 3 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- A CLI tool to segment the lamella slab in cryo-ET volumes☆16Oct 21, 2024Updated last year
- Pytorch Implementation of CryoSPIN, NeurIPS 2024☆18Jan 30, 2025Updated last year
- Converts Dynamo tables to star files for coordinate import into RELION 4.0☆14Jul 25, 2023Updated 2 years ago
- A deep manifold learning framework for 4D cryo-EM data processing for simultaneous determination of high-resolution structures and dynami…☆19Sep 12, 2022Updated 3 years ago
- ☆60Apr 7, 2026Updated 2 months ago
- A CNN for denoising cryo-EM images☆14Dec 9, 2019Updated 6 years ago
- ArtiaX is an open-source extension of the molecular visualisation program ChimeraX.☆43Jun 16, 2026Updated last week