cryo-ET workflow
☆11Sep 17, 2026Updated 3 weeks ago
Alternatives and similar repositories for opusTomo
Users that are interested in opusTomo are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Complementary tools for Relion tomo☆12Mar 9, 2024Updated 2 years ago
- Miscellaneous scripts for processing cryo-ET data☆23Jul 29, 2026Updated 2 months ago
- A CTF Simulation Web App☆13May 11, 2026Updated 4 months ago
- TomoNet is a GUI based pipeline package focusing on cryoET and STA data processing☆23Mar 12, 2026Updated 6 months ago
- Contextual Analysis Tools for cryoET and subtomogram averaging☆42Updated this week
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- automated on-the-fly tilt-series alignment☆11Jul 6, 2021Updated 5 years ago
- Detect and erase gold fiducials in cryo-EM images☆17May 27, 2025Updated last year
- a bidirectional interface between Dynamo and the Warp-RELION-M pipeline☆21Jul 28, 2023Updated 3 years ago
- ☆29Sep 18, 2026Updated 3 weeks ago
- TomoBEAR is a configurable and customizable modular pipeline for streamlined processing of cryo-electron tomographic data for subtomogram…☆30Jun 29, 2025Updated last year
- STOPGAP is a MATLAB-based package for subtomogram averaging.☆40Jun 5, 2026Updated 4 months ago
- Self-supervised deep learning framework for CryoET analysis☆20Sep 28, 2026Updated last week
- ☆11Sep 26, 2026Updated 2 weeks ago
- Web-based dashboards and utilities for RELION 5: live data-collection feedback, metadata analysis and ice-thickness estimation☆23Nov 15, 2025Updated 10 months ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- Very simple script for EPU users which adds beam tilt classes to the star file☆11Nov 3, 2023Updated 2 years ago
- Two-Dimensional Template Matching implemented in Python☆16Sep 24, 2026Updated 2 weeks ago
- a tool for using surfaces to explore volumetric data in napari☆22Jun 13, 2026Updated 3 months ago
- Rapidly simulate realistic cryo-EM particles☆19May 18, 2023Updated 3 years ago
- ☆24May 2, 2025Updated last year
- Self-supervised deep learning for denoising and missing wedge reconstruction of cryo-ET tomograms☆56Jul 29, 2025Updated last year
- SerialEM mdoc files as pandas dataframes☆14Feb 4, 2026Updated 8 months ago
- ☆62Apr 7, 2026Updated 6 months ago
- GPU accelerating computing for Bayesian inference of electron microscopy images. BioEM is a publicly available software that enables the …☆13Apr 7, 2023Updated 3 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Python scripts to manipulate Relion tomo STAR files and much more...☆15Mar 23, 2026Updated 6 months ago
- A curated list of awesome computational cryo-ET methods.☆74Nov 23, 2025Updated 10 months ago
- PyTom software for cryo-tomogram processing☆46Jan 5, 2026Updated 9 months ago
- Tool for reconstruction and analysis of continuous heterogeneity of a cryo-EM dataset☆34Sep 18, 2025Updated last year
- RELION external reconstruct functionality☆12Sep 11, 2020Updated 6 years ago
- simplify the handling of large sets of Euler angles in Python☆33Feb 1, 2022Updated 4 years ago
- Fourier analysis and subtomogram averaging of heterogenic cylindrical structures☆17Updated this week
- Python tool for visualising and interacting with cryo-ET and subtomogram averaging data.☆30Oct 1, 2026Updated last week
- OPUS-SSRI☆13Dec 21, 2022Updated 3 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- 🍦Icecream: a self-supervised framework for cryo-ET reconstruction☆36Sep 15, 2026Updated 3 weeks ago
- Scripts to make cryo-electron tomography a bit easier☆15Updated this week
- A somewhat cleaned-up version of the TOM toolbox for electron tomography☆16Nov 26, 2016Updated 9 years ago
- Python scripts for easy RELION STAR file manipulation.☆28Mar 24, 2026Updated 6 months ago
- Makes RELION 3.1 Optics Groups from EPU AFIS data☆19May 8, 2023Updated 3 years ago
- ☆12Apr 4, 2023Updated 3 years ago
- Pytorch Implementation of CryoSPIN, NeurIPS 2024☆18Jan 30, 2025Updated last year