alncat / opusTomoView external linksLinks
structural heterogeneity analysis for cryo-ET subtomogram
☆10Feb 5, 2026Updated last week
Alternatives and similar repositories for opusTomo
Users that are interested in opusTomo are comparing it to the libraries listed below
Sorting:
- Complementary tools for Relion tomo☆11Mar 9, 2024Updated last year
- Miscellaneous scripts for processing cryo-ET data☆20Feb 25, 2025Updated 11 months ago
- automated on-the-fly tilt-series alignment☆11Jul 6, 2021Updated 4 years ago
- A CTF Simulation Web App☆13Aug 6, 2025Updated 6 months ago
- ☆10Jan 6, 2026Updated last month
- TomoNet is a GUI based pipeline package focusing on cryoET and STA data processing☆21Feb 3, 2026Updated last week
- ☆25Dec 16, 2025Updated last month
- STOPGAP is a MATLAB-based package for subtomogram averaging.☆38Aug 6, 2025Updated 6 months ago
- Rapidly simulate realistic cryo-EM particles☆18May 18, 2023Updated 2 years ago
- Contextual Analysis Tools for cryoET and subtomogram averaging☆34Updated this week
- TomoBEAR is a configurable and customizable modular pipeline for streamlined processing of cryo-electron tomographic data for subtomogram…☆29Jun 29, 2025Updated 7 months ago
- a bidirectional interface between Dynamo and the Warp-RELION-M pipeline☆19Jul 28, 2023Updated 2 years ago
- Python scripts to manipulate Relion tomo STAR files and much more...☆14Sep 12, 2025Updated 5 months ago
- Very simple script for EPU users which adds beam tilt classes to the star file☆11Nov 3, 2023Updated 2 years ago
- ☆23Nov 15, 2025Updated 2 months ago
- a tool for using surfaces to explore volumetric data in napari☆19May 5, 2025Updated 9 months ago
- GPU accelerating computing for Bayesian inference of electron microscopy images. BioEM is a publicly available software that enables the …☆11Apr 7, 2023Updated 2 years ago
- SerialEM mdoc files as pandas dataframes☆14Feb 4, 2026Updated last week
- Detect and erase gold fiducials in cryo-EM images☆15May 27, 2025Updated 8 months ago
- RELION external reconstruct functionality☆12Sep 11, 2020Updated 5 years ago
- ☆12Apr 4, 2023Updated 2 years ago
- Python scripts for easy RELION STAR file manipulation.☆24Jan 21, 2026Updated 3 weeks ago
- A curated list of awesome computational cryo-ET methods.☆67Nov 23, 2025Updated 2 months ago
- OPUS-SSRI☆13Dec 21, 2022Updated 3 years ago
- A CNN for denoising cryo-EM images☆13Dec 9, 2019Updated 6 years ago
- Self-supervised deep learning for denoising and missing wedge reconstruction of cryo-ET tomograms☆49Jul 29, 2025Updated 6 months ago
- Self-supervised deep learning framework for CryoET analysis☆20Jan 28, 2026Updated 2 weeks ago
- Pytorch Implementation of CryoSPIN, NeurIPS 2024☆17Jan 30, 2025Updated last year
- Tool for reconstruction and analysis of continuous heterogeneity of a cryo-EM dataset☆32Sep 18, 2025Updated 4 months ago
- Makes RELION 3.1 Optics Groups from EPU AFIS data☆18May 8, 2023Updated 2 years ago
- A deep manifold learning framework for 4D cryo-EM data processing for simultaneous determination of high-resolution structures and dynami…☆18Sep 12, 2022Updated 3 years ago
- PyTom software for cryo-tomogram processing☆44Jan 5, 2026Updated last month
- Python tool for visualising and interacting with cryo-ET and subtomogram averaging data.☆29Dec 1, 2025Updated 2 months ago
- A somewhat cleaned-up version of the TOM toolbox for electron tomography☆16Nov 26, 2016Updated 9 years ago
- ArtiaX is an open-source extension of the molecular visualisation program ChimeraX.☆41Mar 11, 2025Updated 11 months ago
- ☆19Jan 23, 2026Updated 3 weeks ago
- ☆16Feb 4, 2017Updated 9 years ago
- A set of MATLAB wrapper scripts to help with pre-processing of tomography data.☆20Jan 23, 2026Updated 3 weeks ago
- simplify the handling of large sets of Euler angles in Python☆33Feb 1, 2022Updated 4 years ago