TomoBEAR is a configurable and customizable modular pipeline for streamlined processing of cryo-electron tomographic data for subtomogram averaging.
☆29Jun 29, 2025Updated 10 months ago
Alternatives and similar repositories for TomoBEAR
Users that are interested in TomoBEAR are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Converts Dynamo tables to star files for coordinate import into RELION 4.0☆14Jul 25, 2023Updated 2 years ago
- Complementary tools for Relion tomo☆12Mar 9, 2024Updated 2 years ago
- ☆10Mar 29, 2026Updated last month
- structural heterogeneity analysis and reconstruction for cryo-ET subtomogram☆10Apr 14, 2026Updated 3 weeks ago
- Self-supervised deep learning for denoising and missing wedge reconstruction of cryo-ET tomograms☆54Jul 29, 2025Updated 9 months ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Miscellaneous scripts for processing cryo-ET data☆22Feb 25, 2025Updated last year
- Contextual Analysis Tools for cryoET and subtomogram averaging☆37Apr 14, 2026Updated 3 weeks ago
- STOPGAP is a MATLAB-based package for subtomogram averaging.☆38Aug 6, 2025Updated 8 months ago
- a bidirectional interface between Dynamo and the Warp-RELION-M pipeline☆20Jul 28, 2023Updated 2 years ago
- Scripts to make cryo-electron tomography a bit easier☆15Updated this week
- Neural networks to analyze structural heterogeneity in cryo-electron sub-tomograms☆31Jul 17, 2025Updated 9 months ago
- SerialEM mdoc files as pandas dataframes☆14Feb 4, 2026Updated 3 months ago
- cryo-ET particle picking by representation and metric learning☆44Nov 24, 2025Updated 5 months ago
- Python tool for visualising and interacting with cryo-ET and subtomogram averaging data.☆30Updated this week
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- ArtiaX is an open-source extension of the molecular visualisation program ChimeraX.☆43Mar 11, 2025Updated last year
- A somewhat cleaned-up version of the TOM toolbox for electron tomography☆16Nov 26, 2016Updated 9 years ago
- ☆24Apr 6, 2026Updated 3 weeks ago
- Rapidly simulate realistic cryo-EM particles☆18May 18, 2023Updated 2 years ago
- ☆11Mar 23, 2023Updated 3 years ago
- Very simple script for EPU users which adds beam tilt classes to the star file☆11Nov 3, 2023Updated 2 years ago
- ☆55Aug 19, 2024Updated last year
- automated on-the-fly tilt-series alignment☆11Jul 6, 2021Updated 4 years ago
- Tool for reconstruction and analysis of continuous heterogeneity of a cryo-EM dataset☆32Sep 18, 2025Updated 7 months ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Self-supervised deep learning framework for CryoET analysis☆20Apr 11, 2026Updated 3 weeks ago
- ☆23Nov 15, 2025Updated 5 months ago
- simplify the handling of large sets of Euler angles in Python☆32Feb 1, 2022Updated 4 years ago
- A CTF Simulation Web App☆13Aug 6, 2025Updated 8 months ago
- ☆17Updated this week
- PyTom software for cryo-tomogram processing☆45Jan 5, 2026Updated 4 months ago
- cryo-EM tomogram simulator☆31Apr 23, 2026Updated last week
- IMOD model files as pandas dataframes in Python☆12Jun 26, 2025Updated 10 months ago
- ☆19Jan 23, 2026Updated 3 months ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Anisotropic correction of beam induced sample motion for cryo-electron microscopy and tomography☆59Oct 3, 2025Updated 7 months ago
- Live processing and real time reconstruction of cryo☆53Mar 18, 2026Updated last month
- A Modular Platform for Streamlining Automated Cryo-FIB Workflows☆25Mar 5, 2025Updated last year
- a tool for using surfaces to explore volumetric data in napari☆19Feb 25, 2026Updated 2 months ago
- ☆71Apr 20, 2026Updated 2 weeks ago
- Cellular content mining and particle localization☆10Sep 21, 2025Updated 7 months ago
- Scripts and Tools for Electron Microscopy Image Analysis.☆11Apr 13, 2026Updated 3 weeks ago