KudryashevLab / TomoBEARLinks
TomoBEAR is a configurable and customizable modular pipeline for streamlined processing of cryo-electron tomographic data for subtomogram averaging.
☆28Updated 3 months ago
Alternatives and similar repositories for TomoBEAR
Users that are interested in TomoBEAR are comparing it to the libraries listed below
Sorting:
- cryo-EM tomogram simulator☆29Updated last week
- ☆23Updated 2 weeks ago
- automated on-the-fly tilt-series alignment☆10Updated 4 years ago
- Neural networks to analyze structural heterogeneity in cryo-electron sub-tomograms☆31Updated 2 months ago
- SerialEM mdoc files as pandas dataframes☆13Updated 2 months ago
- Two-Dimensional Template Matching implemented in Python☆12Updated this week
- Complementary tools for Relion tomo☆11Updated last year
- ☆57Updated last week
- Parallel cryo electron tomography via beam image shift☆37Updated this week
- ☆49Updated last year
- Miscellaneous scripts for processing cryo-ET data☆16Updated 7 months ago
- Live processing and real time reconstruction of cryo☆36Updated 2 months ago
- PIP package of cryoCARE☆38Updated last year
- Anisotropic correction of beam induced sample motion for cryo-electron microscopy and tomography☆51Updated last week
- GPU accelerated software package for CTF estimation of cryoEM micrographs and cryoET tilt series☆23Updated 4 months ago
- IMOD model files as pandas dataframes in Python☆11Updated 3 months ago
- Scripts to make cryo-electron tomography a bit easier☆13Updated 2 months ago
- STOPGAP is a MATLAB-based package for subtomogram averaging.☆38Updated 2 months ago
- ☆16Updated 8 years ago
- Pipeline for the automatic detection and segmentation of particles and cellular structures in 3D Cryo-ET data, based on deep learning (co…☆38Updated last year
- Conventions for 3DEM software packages☆19Updated 3 years ago
- a bidirectional interface between Dynamo and the Warp-RELION-M pipeline☆19Updated 2 years ago
- TomoNet is a GUI based pipeline package focusing on cryoET and STA data processing☆18Updated last month
- ☆19Updated 7 months ago
- ☆23Updated last month
- A set of MATLAB wrapper scripts to help with pre-processing of tomography data.☆19Updated last year
- A Modular Platform for Streamlining Automated Cryo-FIB Workflows☆25Updated 7 months ago
- GPU-accelerated template matching for cryo-ET☆46Updated this week
- Makes RELION 3.1 Optics Groups from EPU AFIS data☆18Updated 2 years ago
- ☆10Updated last month