☆19Jan 23, 2026Updated 5 months ago
Alternatives and similar repositories for OccuPy
Users that are interested in OccuPy are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- IMOD model files as pandas dataframes in Python☆13Jun 26, 2025Updated last year
- A software for membrane signal subtraction to facilitate high-resolution cryo-EM reconstruction of membrane proteins embedded in their na…☆14Sep 4, 2025Updated 10 months ago
- Python tool for visualising and interacting with cryo-ET and subtomogram averaging data.☆30Jul 1, 2026Updated 2 weeks ago
- Complementary tools for Relion tomo☆12Mar 9, 2024Updated 2 years ago
- automated on-the-fly tilt-series alignment☆11Jul 6, 2021Updated 5 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- cryo_fit1 source codes, test files, live at .../phenix-xxxx/modules☆10Mar 25, 2022Updated 4 years ago
- ☆40Updated this week
- Tool for reconstruction and analysis of continuous heterogeneity of a cryo-EM dataset☆34Sep 18, 2025Updated 10 months ago
- Two-Dimensional Template Matching implemented in Python☆16Jun 22, 2026Updated 3 weeks ago
- 🍦Icecream: a self-supervised framework for cryo-ET reconstruction☆32Jun 23, 2026Updated 3 weeks ago
- Scripts and Tools for Electron Microscopy Image Analysis.☆11Jun 22, 2026Updated 3 weeks ago
- Neural networks to analyze structural heterogeneity in cryo-electron sub-tomograms☆32Jul 13, 2026Updated last week
- macromolecular structure files (.pdb/.mmCIF) as pandas DataFrames☆10Jun 22, 2026Updated 3 weeks ago
- cryo-ET particle picking by representation and metric learning☆46Nov 24, 2025Updated 7 months ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- ☆80Updated this week
- Fourier analysis and subtomogram averaging of heterogenic cylindrical structures☆17Jun 23, 2026Updated 3 weeks ago
- STOPGAP is a MATLAB-based package for subtomogram averaging.☆38Jun 5, 2026Updated last month
- ☆50Updated this week
- Jupyter-based tool for membrane segmentation manipulation☆10Jul 9, 2025Updated last year
- a tool for using surfaces to explore volumetric data in napari☆22Jun 13, 2026Updated last month
- ☆11Mar 23, 2023Updated 3 years ago
- SerialEM mdoc files as pandas dataframes☆14Feb 4, 2026Updated 5 months ago
- Graphical user interface to integrate cryoEM flexibility analyses with ChimeraX☆24Sep 5, 2024Updated last year
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Useful aliases and startup settings for ChimeraX☆43May 14, 2026Updated 2 months ago
- Scripts for aligning cryo-electron microscopy direct electron detector movies on whole movies or individual particle trajectories☆12Mar 28, 2017Updated 9 years ago
- Very simple script for EPU users which adds beam tilt classes to the star file☆11Nov 3, 2023Updated 2 years ago
- ☆40Updated this week
- IsoNet at higher resolution☆37Jun 25, 2026Updated 3 weeks ago
- OPUS-SSRI☆13Dec 21, 2022Updated 3 years ago
- Anisotropic correction of beam induced sample motion for cryo-electron microscopy and tomography☆61Oct 3, 2025Updated 9 months ago
- simplify the handling of large sets of Euler angles in Python☆32Feb 1, 2022Updated 4 years ago
- Scripts to make cryo-electron tomography a bit easier☆15Updated this week
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- ☆18Sep 20, 2022Updated 3 years ago
- ☆15Jun 1, 2026Updated last month
- Cryo-EM micrograph segmentation through deep learning☆23Oct 10, 2025Updated 9 months ago
- ☆16Feb 4, 2017Updated 9 years ago
- Self-supervised learning for isotropic cryoET reconstruction☆91Dec 29, 2024Updated last year
- From cryo-EM density map to atomic structure☆31Aug 17, 2025Updated 11 months ago
- ☆19Dec 22, 2025Updated 6 months ago