kmboehm / onco-fusion
☆25Updated last year
Related projects ⓘ
Alternatives and complementary repositories for onco-fusion
- Scripts for data processing☆41Updated 5 months ago
- HCC_Deep_learning☆18Updated 4 years ago
- Pan-cancer computational histopathology reveals mutations, tumor composition and prognosis☆74Updated 3 years ago
- Data and code to accompany our Nature publication☆43Updated 2 years ago
- Code from Foersch et al. (Under Construction / Development)☆35Updated last year
- Multimodal deep learning to predict distant recurrence-free probability from digitized H&E tumour slide and tumour stage.☆32Updated 5 months ago
- ☆12Updated last year
- ☆45Updated 2 years ago
- sc-MTOP is an analysis framework based on deep learning and computational pathology. This framework aims to characterize the tumor ecosys…☆27Updated this week
- A vision language model for gigapixel whole slide images in histopathology☆27Updated last month
- deep learning pipeline repository for the paper "Geospatial immune variability illuminates differential evolution of lung adenocarcinoma…☆50Updated 4 years ago
- ☆32Updated 2 years ago
- SALMON: Survival Analysis Learning with Multi-Omics Neural Networks☆69Updated 3 weeks ago
- ☆11Updated last year
- Train a model to predict gene expression from histology slides.☆93Updated 2 years ago
- Code for the im4MEC model described in the paper 'Interpretable deep learning model to predict the molecular classification of endometria…☆35Updated 9 months ago
- ☆18Updated last year
- A pan-cancer platform for mutation prediction from routine histology☆67Updated 3 years ago
- Code for ST_IGI package☆15Updated last week
- Deep learning on histopathology images.☆98Updated 3 years ago
- Deep learning model for the prediction of microsatellite instability in colorectal cancer: a diagnostic study☆27Updated 3 years ago
- Self-supervised representation learning combining GTEx histology, RNA-seq and WGS☆21Updated 2 months ago
- ☆11Updated 3 years ago
- Machine learning for Analysis of Proteomics in Spatial biology - Nature Communications☆48Updated 8 months ago
- ☆30Updated 3 years ago
- Pan-cancer tils analysis study by Hongming Xu☆13Updated 4 years ago
- A Python library for deep learning on whole-slide images☆50Updated 3 years ago
- ☆31Updated last month
- ☆29Updated 3 years ago
- PyTorch implementation of HisToGene☆29Updated 2 years ago