marrlab / HistoGPTLinks
A vision language model for gigapixel whole slide images in histopathology
☆85Updated 3 months ago
Alternatives and similar repositories for HistoGPT
Users that are interested in HistoGPT are comparing it to the libraries listed below
Sorting:
- Multimodal prototyping for cancer survival prediction - ICML 2024☆106Updated 10 months ago
- Analysis of 3D pathology samples using weakly supervised AI - Cell☆110Updated 11 months ago
- Standardized benchmark for computational pathology foundation models.☆121Updated last month
- TCGA Pathology Reports in Machine Readable Text☆58Updated last year
- ☆122Updated last year
- Feather - Lightweight supervised slide foundation models (ICML 2025)☆121Updated 4 months ago
- Transcriptomics-guided Slide Representation Learning in Computational Pathology - CVPR 2024☆113Updated last year
- GrandQC tool for tissue detection and quality control in pathology☆76Updated 9 months ago
- A transformer-based weakly supervised computational pathology method for clinical-grade diagnosis and molecular state revelation of gliom…☆37Updated last year
- Solid Tumor Associative Modeling in Pathology☆102Updated 3 weeks ago
- Morphological Prototyping for Unsupervised Slide Representation Learning in Computational Pathology - CVPR 2024☆145Updated 10 months ago
- Hibou: Foundational Models for Pathology☆75Updated last year
- MADELEINE: multi-stain slide representation learning (ECCV'24)☆64Updated 10 months ago
- ☆171Updated 5 months ago
- ☆78Updated 7 months ago
- Awesome List of Digital and Computational Pathology Resources☆98Updated 11 months ago
- This package provides tools for training supervised machine learning models for computational pathology tasks using tile-level embeddings…☆42Updated 7 months ago
- This repo provides the pipeline of processing TCGA whole-slide images for downstream pathology analysis.☆84Updated 9 months ago
- ☆57Updated 2 years ago
- Visual Language Pretrained Multiple Instance Zero-Shot Transfer for Histopathology Images - CVPR 2023☆112Updated 2 years ago
- Histopathology Slides Preprocessing Pipeline☆42Updated last week
- Modeling Dense Multimodal Interactions Between Biological Pathways and Histology for Survival Prediction - CVPR 2024☆155Updated last year
- List of pathology feature extractors and foundation models☆162Updated 6 months ago
- NuInsSeg: A Fully Annotated Dataset for Nuclei Instance Segmentation in H&E-Stained Histological Images☆39Updated last year
- Weakly-supervised learning pipeline for histopathology images. Publications: Biomarker prediction in colorectal cancer (CRC)☆84Updated last year
- machine-readable information for the TCGA dataset, mirrored from other sources☆21Updated 3 years ago
- Multimodal deep learning to predict distant recurrence-free probability from digitized H&E tumour slide and tumour stage.☆44Updated last year
- ☆20Updated 3 years ago
- Efficient Approach for Guided Local Examination in Digital Pathology☆31Updated 7 months ago
- Leveraging Digital Pathology Foundation Models to characterize the tumor microenvironment (TME)☆24Updated last month