🍊🔬 Bioinformatics add-on for Orange3
☆24Feb 17, 2026Updated 2 months ago
Alternatives and similar repositories for orange3-bioinformatics
Users that are interested in orange3-bioinformatics are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- 🍊 Orange3 add-on for dealing with image related tasks☆35Dec 16, 2025Updated 4 months ago
- 🍊 🎓 Educational widgets for machine learning and data mining in Orange 3.☆27Dec 21, 2025Updated 4 months ago
- 🍊 🕸 Network analysis add-on for Orange data mining suite.☆42Feb 26, 2026Updated 2 months ago
- Conformal Prediction library for Orange3☆10May 24, 2019Updated 6 years ago
- Sequence Distance Graph framework: graph + reads + mapping + analysis☆25Jun 4, 2022Updated 3 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- A curated list of awesome resources, papers, datasets, and tools related to Genomic LLMs. This repository aims to provide a comprehensive…☆18Aug 7, 2024Updated last year
- 🍊 Text Mining add-on for Orange3☆134Nov 21, 2025Updated 5 months ago
- Genome-scale metabolic model of Methylococcus capsulatus.☆12Apr 12, 2019Updated 7 years ago
- Software to process, statistically analyse and visualise deep mutational scanning data☆14Apr 28, 2026Updated last week
- Scripts for Hill et al. (2022) doi:10.1093/molbev/msac085 🟣☆11Apr 28, 2023Updated 3 years ago
- 🍊 Orange add-on for analyzing, visualizing, manipulating, and forecasting time series data.☆66Aug 22, 2025Updated 8 months ago
- FLAME: Full Length Adjecency Matrix Enumeration - is a module that allows for the analysis of ONT Nanopore RNA long-read sequencing data.…☆12May 8, 2025Updated 11 months ago
- Next generation sequence parameter library for proteins☆41Feb 18, 2026Updated 2 months ago
- Pipeline to filter whole exome vcf files and generate a report document for clinical diagnostics.☆14Nov 11, 2019Updated 6 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Pipeline to detect PAVs (presence/absence variations) in genome comparison using whole genome alignment.☆29Mar 5, 2018Updated 8 years ago
- Presentation and exercises for the Software Sustainability Institute Research Data Visualisation Workshop (RDVW)☆15Apr 10, 2018Updated 8 years ago
- A utility framework for the management of genome-scale metabolic models.☆11Mar 28, 2020Updated 6 years ago
- Integrating long read sequencing enhances short read-based locus-specific transposable element quantification☆11May 12, 2025Updated 11 months ago
- A bioinformatics API to interface with public multi-omics bio databases for wicked fast data integration.☆36Jul 10, 2024Updated last year
- This program dereplicates and/or filter nucleotide and/or protein database from a list of names or sequences (by exact match).☆15May 9, 2019Updated 6 years ago
- 🍊 Prototype Orange widgets — only for the brave.☆12Aug 25, 2025Updated 8 months ago
- Scripts and notebooks used in Akgol Oksuz et al. paper☆11Jan 18, 2021Updated 5 years ago
- Script for downloading GitHub.☆13Sep 24, 2020Updated 5 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- A pipeline to identify gene family using mutiple tools and scripts.☆11Aug 22, 2021Updated 4 years ago
- methods for orphan gene prediction paper optimization☆25Dec 24, 2021Updated 4 years ago
- Bash scripts and data used in pantranscriptomic paper☆24Oct 21, 2022Updated 3 years ago
- A nextflow version of the Wochenende reference metagenome binning and visualization pipeline☆16Mar 4, 2026Updated 2 months ago
- HiC-Reg is a tool to predict Hi-C contact counts from one-dimensional regulatory signals☆11Aug 25, 2020Updated 5 years ago
- The R package "sarlacc" contains a pipeline to analyse nanopore sequencing data. It trims adapter sequences, retrieves optional UMI's, cl…☆15Feb 27, 2019Updated 7 years ago
- Exploring Isoform-specific interactions☆13Sep 16, 2025Updated 7 months ago
- Codes for the Iso-Seq variant-calling paper☆11Apr 28, 2023Updated 3 years ago
- Joint normalization of multiple Hi-C matrices, visualization and detection of differential chromatin interactions, supporting covariates.☆10Apr 22, 2022Updated 4 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- isoCirc☆10Nov 27, 2023Updated 2 years ago
- Multiple Genome Viewer☆12Sep 16, 2025Updated 7 months ago
- Bioinformatics tools for dealing with Multiple Alignment Format (MAF) files.☆11Jul 8, 2025Updated 9 months ago
- Gene Set Scoring on the Nearest Neighbor Graph (gssnng) for Single Cell RNA-seq (scRNA-seq) using AnnData h5ad files.☆12Oct 1, 2024Updated last year
- Constraint-based modeling framework for the enumeration of pathway analysis concepts☆14Jul 6, 2023Updated 2 years ago
- ☆15Apr 8, 2026Updated 3 weeks ago
- Single Cell RNA-seq UMI Filtering Facilitator☆11Oct 6, 2025Updated 6 months ago