ππ¬ Bioinformatics add-on for Orange3
β24Jun 22, 2026Updated last month
Alternatives and similar repositories for orange3-bioinformatics
Users that are interested in orange3-bioinformatics are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ππ¬ Orange add-on for gene expression of single cell dataβ17Jun 22, 2026Updated last month
- Genome-scale metabolic model of Methylococcus capsulatus.β12Apr 12, 2019Updated 7 years ago
- Sequence Distance Graph framework: graph + reads + mapping + analysisβ25Jun 4, 2022Updated 4 years ago
- FUNctional toolKIt platform for multi-omic functional analysis. An standardised pipeline to analysis transcriptomic, proteomic, phosphoβ¦β14Jan 20, 2022Updated 4 years ago
- A curated list of awesome resources, papers, datasets, and tools related to Genomic LLMs. This repository aims to provide a comprehensiveβ¦β18Aug 7, 2024Updated 2 years ago
- Deploy on Railway without the complexity - Free Credits Offer β’ AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- β20Oct 5, 2022Updated 3 years ago
- Software to process, statistically analyse and visualise deep mutational scanning dataβ14Aug 3, 2026Updated last week
- Scripts for Hill et al. (2022) doi:10.1093/molbev/msac085 π£β11Apr 28, 2023Updated 3 years ago
- FLAME: Full Length Adjecency Matrix Enumeration - is a module that allows for the analysis of ONT Nanopore RNA long-read sequencing data.β¦β12May 8, 2025Updated last year
- Pipeline to filter whole exome vcf files and generate a report document for clinical diagnostics.β14Nov 11, 2019Updated 6 years ago
- Presentation and exercises for the Software Sustainability Institute Research Data Visualisation Workshop (RDVW)β15Apr 10, 2018Updated 8 years ago
- Pipeline to detect PAVs (presence/absence variations) in genome comparison using whole genome alignment.β31Mar 5, 2018Updated 8 years ago
- Integrating long read sequencing enhances short read-based locus-specific transposable element quantificationβ12May 12, 2025Updated last year
- β12Jun 16, 2023Updated 3 years ago
- Managed Kubernetes at scale on DigitalOcean β’ AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- A bioinformatics API to interface with public multi-omics bio databases for wicked fast data integration.β39Jul 10, 2024Updated 2 years ago
- An R package to plot interactive three-way differential expression analysisβ39Jan 14, 2026Updated 7 months ago
- Constraint-based modeling framework for the enumeration of pathway analysis conceptsβ14Jul 6, 2023Updated 3 years ago
- scripts used to analyse horizontal transfer and evolution of transposable elements in 307 vertebrate speciesβ11May 16, 2021Updated 5 years ago
- Self-contained, one-step literate markdown.β26Mar 13, 2023Updated 3 years ago
- This program dereplicates and/or filter nucleotide and/or protein database from a list of names or sequences (by exact match).β15May 9, 2019Updated 7 years ago
- Scripts and notebooks used in Akgol Oksuz et al. paperβ11Jan 18, 2021Updated 5 years ago
- Code used for mouse single cell RNAseq testis atlasβ12Nov 28, 2020Updated 5 years ago
- methods for orphan gene prediction paper optimizationβ25Dec 24, 2021Updated 4 years ago
- Managed Database hosting by DigitalOcean β’ AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- HiC-Reg is a tool to predict Hi-C contact counts from one-dimensional regulatory signalsβ11Aug 25, 2020Updated 5 years ago
- Bash scripts and data used in pantranscriptomic paperβ24Oct 21, 2022Updated 3 years ago
- Next generation sequence parameter library for proteinsβ42Jul 27, 2026Updated 2 weeks ago
- Joint normalization of multiple Hi-C matrices, visualization and detection of differential chromatin interactions, supporting covariates.β10Jul 9, 2026Updated last month
- Codes for the Iso-Seq variant-calling paperβ11Apr 28, 2023Updated 3 years ago
- A pipeline for the identification of Compound Heterozygous Variantsβ10Nov 10, 2022Updated 3 years ago
- isoCircβ10Nov 27, 2023Updated 2 years ago
- Script for downloading GitHub.β13Sep 24, 2020Updated 5 years ago
- ChimPipe: Accurate detection of fusion genes and transcription-induced chimeras from RNA-seq dataβ15Jan 22, 2026Updated 6 months ago
- 1-Click AI Models by DigitalOcean Gradient β’ AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- A pipeline to identify gene family using mutiple tools and scripts.β11Aug 22, 2021Updated 4 years ago
- Reaction Inclusion by Parsimony and Transcript Distributionβ15Feb 14, 2023Updated 3 years ago
- Bioinformatics tools for dealing with Multiple Alignment Format (MAF) files.β11Updated this week
- Blastocyst-like structures generated from human pluripotent stem cellsβ13Sep 25, 2022Updated 3 years ago
- A comprehensive Model Context Protocol (MCP) server providing advanced access to the UniProt protein database.β19Dec 21, 2025Updated 7 months ago
- Single Cell RNA-seq UMI Filtering Facilitatorβ10Oct 6, 2025Updated 10 months ago
- RNA-binding protein motif analysisβ11Sep 29, 2025Updated 10 months ago