biolab / orange-bio
β9Updated 6 years ago
Alternatives and similar repositories for orange-bio:
Users that are interested in orange-bio are comparing it to the libraries listed below
- ππ¬ Orange add-on for gene expression of single cell dataβ17Updated 7 months ago
- Short course using RStudio for biological data analysisβ14Updated 2 years ago
- Discoverability for gene searchβ12Updated 2 years ago
- Target discovery platform for exploring rankings of genes, disease models, and other entities. @JKU-ICG @datavisynβ12Updated 11 months ago
- β11Updated this week
- ππ¬ Bioinformatics add-on for Orange3β22Updated last month
- Implementation of gene-level rare coding variant association tests targeting allelic series: cases where increasingly deleterious mutatioβ¦β13Updated last week
- qtools has helper functions to submit jobs to compute clusters (PBS on TSCC, SGE on oolite) from within Pythonβ21Updated last year
- Static website generator for sciencey peopleβ30Updated last year
- PyIOmica (pyiomica) is a Python package for omics analyses.β15Updated 2 years ago
- Framework for running text mining tools on latest publications. Main page at:β14Updated 2 years ago
- jinja2-enabled jupyter notebooksβ36Updated 6 months ago
- Bioconda is a distribution of bioinformatics software realized as a channel for the versatile package manager Conda.β38Updated this week
- QTL analysis software for high-dimensional data and complex cross designsβ10Updated 2 months ago
- Distinguishing between generic and experiment-specific gene expression signals.β12Updated 2 years ago
- Home of the Genomic Feature and Variation Ontology (GFVO)β16Updated 3 years ago
- A fast, accurate, and modularized dimensionality reduction approach based on diffusion harmonics and graph layouts. Escalates to millionsβ¦β48Updated 3 years ago
- Code for the data processing pipelineβ17Updated 3 years ago
- Tutorial on programming or "big data"/bioinformaticsβ33Updated 7 years ago
- β12Updated 6 years ago
- Course on good principles & practices in Data Management (https://tinyurl.com/cruk-myrd)β18Updated last year
- Render HTML reports from parametrized jupyter notebooks or Rmarkdown documents.β9Updated 3 months ago
- Single Cell Multiplexed Imaging Jupyter Voila Dashboard using CODEX Dataβ16Updated last year
- R vignettes/pkgdown for elementary statistics for a summer courseβ14Updated last month
- Exposing public genomics data via computable and searchable metadataβ12Updated 7 months ago
- Examples using R and 1000 genomes dataβ28Updated 3 years ago
- Software for exploration of gene expression data from single-cell RNA sequencing.β28Updated 5 years ago
- Snakemake-like pipeline manager for reproducible Jupyter Notebooksβ17Updated 3 years ago
- Genevieve genome report toolβ14Updated 2 years ago
- Platform for integrating genomic analysis with Jupyter Notebooks.β44Updated 6 months ago