opentargets-archive / data_pipelineLinks
Code for the data processing pipeline
☆17Updated 4 years ago
Alternatives and similar repositories for data_pipeline
Users that are interested in data_pipeline are comparing it to the libraries listed below
Sorting:
- Mark2Cure allows anyone that can read English, regardless of background, to help in the process of biomedical discovery.☆14Updated 2 years ago
- A software toolkit for the interconversion of standard data models for phenotypic data☆14Updated 2 months ago
- jinja2-enabled jupyter notebooks☆37Updated 2 weeks ago
- Resources for grounding protein families and complexes from text and describing their hierarchical relationships.☆18Updated last year
- Discoverability for gene search☆12Updated 2 years ago
- The Gene Ontology Helpdesk☆16Updated 5 months ago
- Open Targets Library ETL Pipeline | Apache Beam☆16Updated 4 years ago
- BioThings API framework - Making high-performance API for biological annotation data☆47Updated 3 weeks ago
- In Silico Prediction of Novel Therapeutic Targets Using Gene – Disease Association Data☆18Updated 7 years ago
- R package for easy access, manipulation, and analysis of the Monarch Initiative or other KGX-formatted knowledge graphs.☆14Updated last month
- Toolkit for constructing, analyzing, and visualizing data-driven ontologies☆18Updated 6 years ago
- A specification and Python implementation for representing variants from Multiplexed Assays of Variant Effect.☆10Updated 2 months ago
- Map your disease and phenotype terms to the Open Targets platform ontology☆21Updated 3 weeks ago
- Home of the Genomic Feature and Variation Ontology (GFVO)☆16Updated 4 years ago
- ☆11Updated 2 years ago
- A Python package for benchmarking pathway database with functional enrichment and classification methods☆13Updated 4 years ago
- Software for analyzing high dimensional dose-response data☆19Updated 11 months ago
- The SnoVault general purpose hybrid object-relational database☆16Updated last year
- DrugBank dataset files in R dataframes☆15Updated 5 months ago
- Target prioritization using network representation learning☆11Updated 3 years ago
- A collection of useful python functions for looking up information and working with the Biolink Model☆24Updated 3 weeks ago
- A stitching platform for InXight☆15Updated 3 months ago
- Target discovery platform for exploring rankings of genes, disease models, and other entities. @JKU-ICG @datavisyn☆12Updated last year
- Draft cell type definitions from data - candidates for inclusion in CL☆12Updated last week
- Open Targets evidence normalization and scoring pipeline☆12Updated 2 years ago
- ☆24Updated 4 years ago
- Class materials for the NIH HPC snakemake class☆16Updated 9 months ago
- ☆10Updated 8 months ago
- Outcomes Insights' Data Model for Clinical Research☆19Updated 2 months ago
- BioDWH2 is an easy-to-use, automated, graph-based data warehouse and mapping tool for bioinformatics and medical informatics.☆17Updated last month