Alternatives and similar repositories for data_pipeline:

Users that are interested in data_pipeline are comparing it to the libraries listed below

• enricoferrero / TargetPred
  In Silico Prediction of Novel Therapeutic Targets Using Gene – Disease Association Data
  ☆18Updated 6 years ago
• opentargets / OnToma
  Map your disease and phenotype terms to the Open Targets platform ontology
  ☆21Updated last month
• bio2bel / drugbank
  A Bio2BEL package for DrugBank (https://www.drugbank.ca)
  ☆9Updated 4 years ago
• opentargets-archive / library-beam
  Open Targets Library ETL Pipeline | Apache Beam
  ☆16Updated 3 years ago
• sorgerlab / famplex
  Resources for grounding protein families and complexes from text and describing their hierarchical relationships.
  ☆18Updated 6 months ago
• Caleydo / ordino
  Target discovery platform for exploring rankings of genes, disease models, and other entities. @JKU-ICG @datavisyn
  ☆12Updated 10 months ago
• michaelkyu / ddot
  Toolkit for constructing, analyzing, and visualizing data-driven ontologies
  ☆18Updated 5 years ago
• biopragmatics / bioversions
  🪝 What's the latest version for each database?
  ☆27Updated this week
• broadinstitute / gene-hints
  Discoverability for gene search
  ☆12Updated last year
• GuiltyTargets / guiltytargets
  Target prioritization using network representation learning
  ☆11Updated 3 years ago
• dhimmel / integrate
  Scripts and resources to create Hetionet v1.0, a heterogeneous network for drug repurposing
  ☆32Updated 7 years ago
• monarch-initiative / biolink-api
  API for linked biological knowledge
  ☆64Updated 2 years ago
• interstellar-Consultation-Services / dbdataset
  DrugBank dataset files in R dataframes
  ☆12Updated 8 months ago
• ncats / stitcher
  A stitching platform for InXight
  ☆16Updated 2 months ago
• emreg00 / proximity
  Drug-disease proximity based therapeutic effect screening and analysis
  ☆19Updated 7 years ago
• insitro / AllelicSeries
  Implementation of gene-level rare coding variant association tests targeting allelic series: cases where increasingly deleterious mutatio…
  ☆13Updated last week
• BaderLab / netDx
  R package with netDx software and data for examples
  ☆12Updated last year
• biothings / mychem.info
  MyChem.info: A BioThings API for chemical/drug annotations
  ☆16Updated this week
• seffnet / seffnet
  Network representation learning on drug-target-side effects-indication graphs for side effect prediction
  ☆13Updated 4 years ago
• biothings / biothings.api
  BioThings API framework - Making high-performance API for biological annotation data
  ☆46Updated this week
• SuLab / mark2cure
  Mark2Cure allows anyone that can read English, regardless of background, to help in the process of biomedical discovery.
  ☆14Updated 2 years ago
• esacinc / PDC-Public
  The public repository for the Proteomic Data Commons UI and APIs
  ☆13Updated 7 months ago
• biocypher / clinical-knowledge-graph
  ☆13Updated 7 months ago
• pathwayforte / pathway-forte
  A Python package for benchmarking pathway database with functional enrichment and classification methods
  ☆13Updated 3 years ago
• geneontology / helpdesk
  The Gene Ontology Helpdesk
  ☆16Updated last week
• AlexsLemonade / RNA-Seq-Exercises
  Exercises for training scientists to perform some RNA-seq analyses.
  ☆11Updated 5 years ago
• johnbachman / famplex
  Namespace encoding hierarchical relationships between proteins, protein families, and protein complexes.
  ☆12Updated 3 years ago
• bio2bel / bio2bel
  A Python framework for integrating biological databases and structured data sources in Biological Expression Language (BEL)
  ☆21Updated 3 years ago
• MaayanLab / appyter
  jinja2-enabled jupyter notebooks
  ☆35Updated 5 months ago
• phenopolis / pheno4j
  Pheno4j: a graph based HPO to NGS database
  ☆32Updated last year