Alternatives and similar repositories for ipynb

Users that are interested in ipynb are comparing it to the libraries listed below

• cytoscape / cytoscape-manual
  Markdown version of Cytoscape manual
  ☆11Updated 6 months ago
• scikit-bio / scikit-bio-cookbook
  Recipes for bioinformatics analyses with scikit-bio
  ☆42Updated 8 years ago
• kbroman / qtl2
  QTL analysis software for high-dimensional data and complex cross designs
  ☆10Updated this week
• waldronlab / AppStatBio
  Applied Statistics for High-Throughput Biology
  ☆16Updated 10 months ago
• rnabioco / practical-data-analysis
  Short course using RStudio for biological data analysis
  ☆14Updated 2 years ago
• Edinburgh-Genome-Foundry / SBOL-Visual-CSS
  Draw genetic elements with HTML & CSS
  ☆16Updated 8 years ago
• fastlmm / PySnpTools
  A Python library for reading and manipulating genetic data.
  ☆22Updated 7 months ago
• ngs-docs / ngs-notebooks
  ☆30Updated 11 years ago
• adelq / rosalind
  A set of solutions for tasks from Rosalind project using Python
  ☆8Updated 7 years ago
• DugongBioinformatics / Dugong
  Dugong - Scientific Linux Container
  ☆18Updated 6 years ago
• biolab / orange-bio
  ☆9Updated 7 years ago
• cjlee112 / pygr
  Python graph database framework for bioinformatics
  ☆93Updated 3 years ago
• mfiers / Moa
  Lightweight workflows in bioinformatics:
  ☆24Updated 10 years ago
• swcarpentry / DEPRECATED-boot-camps
  DEPRECATED: please see individual lesson repositories for current material.
  ☆96Updated 8 years ago
• datacarpentry / R-genomics
  Lesson on data analysis and visualization in R for genomics
  ☆43Updated 6 years ago
• molpopgen / BigDataFormats
  Tutorial on programming or "big data"/bioinformatics
  ☆32Updated 7 years ago
• ethanwhite / progbio
  Teaching materials for classes teaching programming to biologists
  ☆52Updated last year
• jnoms / virID
  Viral Identification and Discovery - A viral characterization pipeline built in Nextflow.
  ☆11Updated 5 years ago
• tiagoantao / pygenomics
  A library for next generation genomics in Python 3
  ☆18Updated 7 years ago
• clintval / genome-browser
  A lightweight Python graphing API for genomic features
  ☆15Updated 2 years ago
• lynnlangit / AdvancedPythonForBio
  Work from the book 'Advanced Python for Biologists'
  ☆11Updated 6 years ago
• mtarbit / Rosalind-Problems
  Solutions to problems from http://rosalind.info/
  ☆37Updated 12 years ago
• audy / bioinformatics-hacks
  Scripts for miscelleneous bioinformatics tasks
  ☆48Updated 5 years ago
• tiagoantao / data-science-teaching
  Teaching data science
  ☆8Updated 8 years ago
• etetoolkit / cookbook
  ☆19Updated 9 years ago
• ucscXena / xena-GDC-ETL
  Extract, transform and load GDC data onto UCSC Xena
  ☆13Updated 7 months ago
• hbc / NGS-Data-Analysis-long-course
  ☆11Updated 7 years ago
• rabix / benten
  A language server for Common Workflow Language
  ☆65Updated last year
• opencb / hpg-variant
  A complete suite of tools to work with genomic variation data, from VCF tools to variant profiling or genomic statistics
  ☆13Updated 9 years ago
• torognes / inf9380
  High-Performance Computing in Bioinformatics
  ☆21Updated 3 years ago