Conda recipes for the bioconda channel.
☆1,808Apr 29, 2026Updated this week
Alternatives and similar repositories for bioconda-recipes
Users that are interested in bioconda-recipes are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Utilities for building and managing bioconda recipes☆106Apr 19, 2026Updated last week
- Aggregate results from bioinformatics analyses across many samples into a single report.☆1,445Updated this week
- An ultra-fast all-in-one FASTQ preprocessor (QC/adapters/trimming/filtering/splitting/merging...)☆2,341Updated this week
- A versatile pairwise aligner for genomic and spliced nucleotide sequences☆2,164Updated this week
- Tools (written in C using htslib) for manipulating next-generation sequencing data☆1,887Updated this week
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- A cross-platform and ultrafast toolkit for FASTA/Q file manipulation☆1,543Updated this week
- bedtools - the swiss army knife for genome arithmetic☆1,029Mar 11, 2025Updated last year
- Burrow-Wheeler Aligner for short-read alignment (see minimap2 for long-read alignment)☆1,731Mar 22, 2025Updated last year
- Pysam is a Python package for reading, manipulating, and writing genomics data such as SAM/BAM/CRAM and VCF/BCF files. It's a lightweight…☆888Updated this week
- Toolkit for processing sequences in FASTA/Q formats☆1,538Jun 1, 2025Updated 10 months ago
- A DSL for data-driven computational pipelines☆3,356Updated this week
- BWK awk modified for biological data☆639Aug 11, 2022Updated 3 years ago
- Graph-based alignment (Hierarchical Graph FM index)☆534Jan 27, 2026Updated 3 months ago
- Tools to process and analyze deep sequencing data.☆759Jul 23, 2025Updated 9 months ago
- Open source password manager - Proton Pass • AdSecurely store, share, and autofill your credentials with Proton Pass, the end-to-end encrypted password manager trusted by millions.
- Official git repository for Biopython (originally converted from CVS)☆4,997Updated this week
- Bioinformatics containers☆788Mar 30, 2026Updated 3 weeks ago
- conda recipes for genomic data☆84Jul 31, 2021Updated 4 years ago
- annotate a VCF with other VCFs/BEDs/tabixed files☆401Aug 30, 2025Updated 7 months ago
- Validated, scalable, community developed variant calling, RNA-seq and small RNA analysis☆1,028Aug 24, 2024Updated last year
- The next version of bwa-mem☆829Oct 15, 2025Updated 6 months ago
- Official code repository for GATK versions 4 and up☆1,940Updated this week
- Python wrapper -- and more -- for BEDTools (bioinformatics tools for "genome arithmetic")☆330Mar 16, 2025Updated last year
- This is the development home of the workflow management system Snakemake. For general information, see☆2,764Updated this week
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- scikit-bio: a community-driven Python library for bioinformatics, providing versatile data structures, algorithms and educational resourc…☆1,196Updated this week
- DeepVariant is an analysis pipeline that uses a deep neural network to call genetic variants from next-generation DNA sequencing data.☆3,685Mar 19, 2026Updated last month
- GFF and GTF file manipulation and interconversion☆317Mar 31, 2026Updated 3 weeks ago
- tools for working with genome variation graphs☆1,306Updated this week
- Cutadapt removes adapter sequences from sequencing reads☆578Apr 6, 2026Updated 3 weeks ago
- Bayesian haplotype-based genetic polymorphism discovery and genotyping.☆865Apr 20, 2026Updated last week
- Quickly search, compare, and analyze genomic and metagenomic data sets.☆542Apr 23, 2026Updated last week
- Tools for working with SAM/BAM data☆610Dec 22, 2024Updated last year
- Efficient pythonic random access to fasta subsequences☆485Mar 19, 2026Updated last month
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Plot structural variant signals from many BAMs and CRAMs☆566Jul 13, 2024Updated last year
- RNA-seq aligner☆2,188Mar 18, 2025Updated last year
- A curated list of nextflow based pipelines☆625Jun 23, 2025Updated 10 months ago
- Tool Shed repositories maintained by the Intergalactic Utilities Commission☆199Updated this week
- A fast and sensitive gapped read aligner☆789Mar 7, 2026Updated last month
- Genome inference from a population reference graph☆96Apr 1, 2025Updated last year
- FlowCraft: a component-based pipeline composer for omics analysis using Nextflow.☆248Aug 10, 2025Updated 8 months ago