bioconda / bioconda-recipesLinks
Conda recipes for the bioconda channel.
☆1,777Updated this week
Alternatives and similar repositories for bioconda-recipes
Users that are interested in bioconda-recipes are comparing it to the libraries listed below
Sorting:
- tools for working with genome variation graphs☆1,292Updated last week
- Validated, scalable, community developed variant calling, RNA-seq and small RNA analysis☆1,026Updated last year
- Bioinformatics containers☆772Updated 3 months ago
- An interactive explorer for single-cell transcriptomics data☆747Updated this week
- Aggregate results from bioinformatics analyses across many samples into a single report.☆1,417Updated 3 weeks ago
- An analysis and visualization platform for 'omics data☆499Updated this week
- 🐟 🍣 🍱 Highly-accurate & wicked fast transcript-level quantification from RNA-seq reads using selective alignment☆856Updated last year
- Trinity RNA-Seq de novo transcriptome assembly☆881Updated 11 months ago
- Pipeline components for real-time phylodynamic analysis☆275Updated last week
- Cloud-native genomic dataframes and batch computing☆1,046Updated this week
- RNA sequencing analysis pipeline using STAR, RSEM, HISAT2 or Salmon with gene/isoform counts and extensive quality control.☆1,190Updated this week
- Toolkit for processing sequences in FASTA/Q formats☆1,524Updated 8 months ago
- Scripts to download genomes from the NCBI FTP servers☆1,059Updated 6 months ago
- A curated list of nextflow based pipelines☆620Updated 7 months ago
- python module to plot beautiful and highly customizable genome browser tracks☆862Updated last year
- Near-optimal RNA-Seq quantification☆720Updated 2 weeks ago
- SRA Tools☆1,295Updated this week
- A collection of Galaxy-related training material☆344Updated this week
- MACS -- Model-based Analysis of ChIP-Seq☆767Updated this week
- Pysam is a Python package for reading, manipulating, and writing genomics data such as SAM/BAM/CRAM and VCF/BCF files. It's a lightweight…☆877Updated 3 weeks ago
- Applied Computational Genomics Course at UU: Spring 2020☆1,073Updated last year
- Integrative Genomics Viewer. Fast, efficient, scalable visualization tool for genomics data and annotations☆714Updated last week
- Unix, R and python tools for genomics and data science☆1,360Updated 5 months ago
- Rapid prokaryotic genome annotation☆953Updated 3 weeks ago
- Analysis pipeline to detect germline or somatic variants (pre-processing, variant calling and annotation) from WGS / targeted sequencing☆541Updated this week
- Incubator for useful bioinformatics code, primarily in Python and R☆645Updated last year
- Bioinformatics code libraries and scripts☆555Updated 6 months ago
- A fast and sensitive gapped read aligner☆768Updated last week
- Collection of bioinformatics training materials☆1,092Updated 2 weeks ago
- Embeddable genomic visualization component based on the Integrative Genomics Viewer☆706Updated 2 weeks ago