Dipy pipeline for reconstruction and tracking of tractography from Human Connectome Project dataset
☆11Nov 18, 2015Updated 10 years ago
Alternatives and similar repositories for HCP-Tractography
Users that are interested in HCP-Tractography are comparing it to the libraries listed below
Sorting:
- FSL randomise related scripts☆10Jan 10, 2022Updated 4 years ago
- Python script to obtain dynamic functional connectivity metrics, after using a sliding window approach, statistical analyses to test for …☆12Sep 10, 2024Updated last year
- ☆12Apr 21, 2021Updated 4 years ago
- A package to study complex networks based on the temporal evolution of their Dynamic Communicability and Flow.☆11Jan 30, 2026Updated last month
- MATLAB Framework for Non Cartesian Reconstruction☆10Apr 10, 2023Updated 2 years ago
- Scripts for MRI preprocessing☆10Oct 11, 2020Updated 5 years ago
- Biophysical interpretable neural network.☆15May 7, 2018Updated 7 years ago
- Method for encoding brain connectomes in multidimensional arrays (tensors).☆40Apr 2, 2021Updated 4 years ago
- CNN based brain masking☆18Jun 11, 2025Updated 8 months ago
- "DFC: Anatomically Informed Fiber Clustering with Self-supervised Deep Learning for Fast and Effective Tractography Parcellation".☆19May 1, 2023Updated 2 years ago
- White matter tractography clustering and more...☆80Jun 13, 2025Updated 8 months ago
- PET Unified Pipeline☆24Oct 13, 2020Updated 5 years ago
- Dynamic Contrast Enhanced (DCE) MRI Analysis Software☆52Mar 1, 2026Updated last week
- Software interfaces for interacting with brain atlases - Python client☆57Updated this week
- This version is OBSOLETE. Please use http://github.com/thalamicseg/hipsthomasdocker which is the latest and maintained © Copyright Manoj…☆25Oct 10, 2025Updated 4 months ago
- Generate subject connectomes from raw BIDS data & perform inter-subject connection density normalisation, using the MRtrix3 software pac…☆54Updated this week
- DL+DiReCT - Direct Cortical Thickness Estimation using Deep Learning-based Anatomy Segmentation and Cortex Parcellation☆30Apr 16, 2025Updated 10 months ago
- This is a reconstruction pipeline to reconstruct raw MRI data acquired with a Siemens MR scanner using gradient recalled echo (GRE) seque…☆30Oct 16, 2019Updated 6 years ago
- Estimation, analysis and decomposition of brainwave spatiotemporal dynamics☆30Jul 6, 2021Updated 4 years ago
- MAgnetic Resonance Integral Equation suite☆35Mar 14, 2017Updated 8 years ago
- Please visit our new location: https://github.com/tractometry/pyAFQ☆60Oct 10, 2024Updated last year
- Python module for processing dynamic contrast enhanced magnetic resonance imaging (DCE-MRI) data☆32Apr 28, 2022Updated 3 years ago
- This repository will host scripts used to map structural and functional brain connectivity matrices for the UK biobank dataset.☆72Dec 3, 2025Updated 3 months ago
- Browser-based visualization tools for AFQ results☆33Aug 20, 2024Updated last year
- Conquering confounds and covariates: methods, library and guidance☆40Mar 21, 2024Updated last year
- fMRIPrep for Rodents☆13Feb 17, 2026Updated 2 weeks ago
- An integrated framework for DWI Image QC and processing☆13Feb 23, 2026Updated last week
- Repo for Brain Networks course☆35Nov 7, 2018Updated 7 years ago
- Automated deep-learning based brain tumor segmentation on MRI☆38Aug 24, 2022Updated 3 years ago
- Hongfu Sun's MATLAB codes for QSM reconstruction pipeline.☆76Mar 26, 2025Updated 11 months ago
- The original Fibernavigator: tool for vizualization of DTI and MRI data☆38Jan 28, 2019Updated 7 years ago
- An analysis tool that uses per-voxel statistical maps in conjunction with FSL atlases to create per-region statistical maps. Current usag…☆13May 2, 2024Updated last year
- Introduction to Machine Learning using scikit-learn and PyTorch☆10Sep 26, 2019Updated 6 years ago
- ☆13Oct 10, 2019Updated 6 years ago
- GOAT: efficient and robust identification of gene set enrichment☆14Jan 24, 2026Updated last month
- Implementation of Mejias et al. 2016: Feedforward and feedback frequency-dependent interactions in a large-scale laminar network of the p…☆10Nov 25, 2025Updated 3 months ago
- An open brain MRI dataset and baseline evaluations for tumor recurrence prediction☆11Apr 29, 2024Updated last year
- This repository houses the code for anatomically and physiologically motivated, hepatic vessel generation.☆12Apr 15, 2024Updated last year
- ☆10Jun 26, 2018Updated 7 years ago