Alternatives and similar repositories for MRtrix_Analysis_Scripts

Users that are interested in MRtrix_Analysis_Scripts are comparing it to the libraries listed below

• caseypaquola / BigBrainWarp
  BigBrainWarp
  ☆27Updated 3 months ago
• MidnightScanClub / MSCcodebase
  The Midnight Scanning Club Codebase
  ☆37Updated 6 years ago
• faskowit / multiAtlasTT
  multi atlas transfer tools for neuroimaging (maTT)
  ☆66Updated 10 months ago
• dutchconnectomelab / Simple-Brain-Plot
  brainPlot is a MATLAB function to create simple line-art brain plots.
  ☆99Updated 4 years ago
• bids-apps / freesurfer
  BIDS app wrapping recon-all from FreeSurfer
  ☆43Updated 2 weeks ago
• StuartJO / plotSurfaceROIBoundary
  Plot the boundaries of ROIs on a surface
  ☆68Updated 6 months ago
• NeuroanatomyAndConnectivity / gradient_analysis
  ☆100Updated 8 years ago
• neurodata / neuroparc
  ☆197Updated 2 years ago
• TingsterX / alignment_macaque-human
  cross-species alignment (joint-embedding between human and macaque)
  ☆29Updated 3 years ago
• bids-apps / MRtrix3_connectome
  Generate subject connectomes from raw BIDS data & perform inter-subject connection density normalisation, using the MRtrix3 software pac…
  ☆52Updated 3 months ago
• murraylab / brainsmash
  Brain Surrogate Maps with Autocorrelated Spatial Heterogeneity
  ☆50Updated last year
• HumanBrainED / NHP-BrainExtraction
  ☆39Updated 3 years ago
• juryxy / JuSpace
  This is the repository for the JuSpace toolbox allowing for cross-modal correlations between imaging data and positron emission tomograph…
  ☆60Updated 5 months ago
• MICA-MNI / BrainStat
  A statistics and context decoding toolbox for neuroimaging.
  ☆110Updated last year
• nipreps / dmriprep
  dMRIPrep is a robust and easy-to-use pipeline for preprocessing of diverse dMRI data. The transparent workflow dispenses of manual interv…
  ☆71Updated last year
• suyashdb / hcp2bids
  To convert Human Connectome projects(HCP) data to BIDS std
  ☆29Updated 3 years ago
• MICA-MNI / micaopen
  Open Scripts and pipelines from the Multimodal Imaging and Connectome Analysis Lab at the Montreal Neurological Institute
  ☆80Updated 5 months ago
• nipreps / sdcflows
  Susceptibility Distortion Correction (SDC) workflows for EPI MR schemes
  ☆43Updated last week
• edickie / ciftify
  The tools of the Human Connectome Project (HCP) adapted for working with non-HCP datasets
  ☆127Updated 2 years ago
• NeuroanatomyAndConnectivity / surfdist
  For calculating exact geodesic distances on cortical surface meshes
  ☆53Updated last year
• wayalan / HCPex
  An extended Human Connectome Project multimodal parcellation atlas of the human cortex and subcortical areas
  ☆37Updated last year
• yetianmed / subcortex
  ☆129Updated 3 months ago
• rmldj / hcp-utils
  Utilities to use HCP and HCP-like data with nilearn and other Python tools
  ☆47Updated 2 years ago
• templateflow / templateflow
  The TemplateFlow Archive - A DataLad super-dataset
  ☆90Updated last week
• ColeLab / ColeAnticevicNetPartition
  Public release of The Cole-Anticevic Brain-wide Network Partition (CAB-NP)
  ☆79Updated 4 years ago
• HALFpipe / HALFpipe
  ENIGMA HALFpipe is a user-friendly software that facilitates reproducible analysis of fMRI data
  ☆105Updated last week
• SIMEXP / load_confounds
  Load fMRIprep confounds in python
  ☆37Updated 3 years ago
• NSBLab / BrainEigenmodes
  Code supporting 'Geometric constraints on human brain function'
  ☆106Updated 6 months ago
• arielletambini / denoiser
  Nuisance removal tool for fMRI data
  ☆57Updated last year
• miykael / parcellation_fragmenter
  Fragments FreeSurfer parcellation annotation in N-equal sized parcels
  ☆28Updated 5 years ago