aneeshbal / SimpylCellCounterView external linksLinks
SimpylCellCounter - An Automated Solution for Quantifying Cells in Brain Tissue
☆16Dec 5, 2022Updated 3 years ago
Alternatives and similar repositories for SimpylCellCounter
Users that are interested in SimpylCellCounter are comparing it to the libraries listed below
Sorting:
- A cell counter using computer vision techniques.☆10May 13, 2022Updated 3 years ago
- A GUI based on napari for counting cells automatically in cell migration experiments☆46Nov 21, 2022Updated 3 years ago
- XTensions built using Python 3.7 for Imaris software☆11Jan 8, 2026Updated last month
- Calcium imaging inter-session alignment☆16Dec 18, 2025Updated last month
- Use ChatGPT API gpt-3.5-turbo and python Flask to build a interactive chat website☆10Apr 16, 2024Updated last year
- Repo for CCN workshop on caiman and mesmerize in January 2023☆13Mar 3, 2023Updated 2 years ago
- Work towards creating a common JSON based format for compact network specification☆14Jan 6, 2026Updated last month
- Conditional Linear Dynamical Systems☆15Oct 7, 2025Updated 4 months ago
- Fast optimisation of tuning curves by iterative refitting and decoding☆14Dec 10, 2025Updated 2 months ago
- Source code of our paper: An overlapping community detection algorithm based on density peaks☆13Apr 14, 2018Updated 7 years ago
- A multi-species, multi-ephys format histology processing and probe alignment pipeline☆13Mar 20, 2024Updated last year
- A fast, microcontroller-based dynamic clamp system☆13May 17, 2025Updated 8 months ago
- pipeline for volumetric cell segmentation☆14Feb 5, 2026Updated last week
- A visualization app for 3D-registered data processed in ABBA and QuPath☆20Oct 21, 2022Updated 3 years ago
- Stream data from PrairieView into MATLAB to allow online processing and analysis☆13Jan 1, 2024Updated 2 years ago
- my dissertation!☆11Sep 6, 2022Updated 3 years ago
- This code impliments a multi-focus color image fusion method based on focus region detection with edge preseve using bilateral filter and…☆10Sep 18, 2019Updated 6 years ago
- The PsychonautWiki substance dose chart.☆11Sep 13, 2018Updated 7 years ago
- A repository of my Xilinx Open Hardware 2020 submission including a demo of support vector machines on PYNQ, C++ source code and projects…☆16Jun 27, 2020Updated 5 years ago
- A bridge for b-parasites☆14Mar 21, 2022Updated 3 years ago
- Zarr filesystem backend for N5☆19Updated this week
- Multilayer Perceptron Implementation in Python☆13Jun 21, 2022Updated 3 years ago
- Platform for Calcium Imaging analysis. DEPRECATED.☆62Nov 26, 2023Updated 2 years ago
- R Scripts to analyze deep lab cut point data and related data☆71Jan 25, 2023Updated 3 years ago
- ☆18Feb 1, 2024Updated 2 years ago
- ImageJ convenience layer for N5☆19Feb 4, 2026Updated last week
- ABBA, controlled from python☆19Nov 24, 2025Updated 2 months ago
- Tool to help inspect NWB files for compliance with NWB Best Practices☆21Updated this week
- Open source rodent behavior measurement and control☆18Jul 5, 2017Updated 8 years ago
- ☆30Jan 9, 2026Updated last month
- 🧬 Terminal utility to track, analyze and predict intake of chemical compounds in name of science.☆19Oct 24, 2025Updated 3 months ago
- 一套工具组,包括访问链接, 获取元素,抽取文件等等 也有已经实现好通过scihub获取论文的小工具,还有对于pdf转doc,文本翻译,代理连接获取以及通过api获取代理链接, PDF文件合并,PDF文件截取某些页,CSV,xls文件处理等☆18Feb 16, 2024Updated last year
- Lightweight data specification for systems neuroscience, inspired by BIDS.☆20Dec 16, 2025Updated last month
- Automatic Multiscale-based Peak Detection (AMPD)☆18Jan 7, 2014Updated 12 years ago
- geant4 simulation HPGe detector☆24Jul 15, 2016Updated 9 years ago
- GIve easy, high-level access to ome-zarr fileset☆22Sep 22, 2025Updated 4 months ago
- SimBA (Simple Behavioral Analysis), a pipeline and GUI for developing supervised behavioral classifiers☆351Updated this week
- matlab fuction for reading abf files including v2.0 files☆22May 30, 2025Updated 8 months ago
- Analyze neuroscience data in the cloud☆19Sep 6, 2024Updated last year