Alternatives and similar repositories for neuro-notebook-templates

Users that are interested in neuro-notebook-templates are comparing it to the libraries listed below

• EnnyvanBeest / UnitMatch
  Ephys toolbox to match single units (electrophysiology) either within the same day (over splits) or across two days
  ☆68Updated last week
• m-beau / NeuroPyxels
  NeuroPyxels (npyx) is a python library built for electrophysiologists using Neuropixels electrodes. This package stems from the need of a…
  ☆132Updated 3 months ago
• zivlab / CellReg
  Registration of cells across sessions.
  ☆76Updated last year
• petersaj / neuropixels_trajectory_explorer
  Neuropixels trajectory explorer with the Allen CCF mouse atlas
  ☆77Updated 5 months ago
• Julie-Fabre / awesome_neuropixels
  A curated list of awesome Neuropixels resources.
  ☆112Updated 2 weeks ago
• int-brain-lab / iblapps
  pyqt5 dependent applications for IBL sessions
  ☆29Updated 2 weeks ago
• Whitlock-Group / HERBS
  ☆52Updated last year
• LorenFrankLab / spyglass
  Neuroscience data analysis framework for reproducible research built by Loren Frank Lab at UCSF
  ☆103Updated this week
• djamesbarker / pMAT
  Fiber Photometry Modular Analysis Tool Suite
  ☆40Updated 4 years ago
• SpikeInterface / probeinterface
  Python package to handle probe layout, geometry and wiring to device.
  ☆72Updated last week
• neuroethology / bentoMAT
  A gui for browsing joint calcium imaging + behavioral data.
  ☆54Updated 8 months ago
• jenniferColonell / ecephys_spike_sorting
  Modules for processing extracellular electrophysiology data from Neuropixels probes
  ☆63Updated this week
• SpikeInterface / spiketutorials
  Tutorials for using SpikeInterface on extracellular datasets.
  ☆66Updated last year
• petersaj / AP_histology
  Histology processing
  ☆70Updated 3 weeks ago
• Coen-Lab / chronic-neuropixels
  CAD files for the Apollo Implant: a device for Chronic Neuropixels Implantation
  ☆29Updated 2 months ago
• backprop64 / DAMM
  A codebase for tracking laboratory mice in videos
  ☆11Updated last month
• MouseLand / facemap
  Framework for predicting neural activity from mouse orofacial movements tracked using a pose estimation model. Package also includes sing…
  ☆175Updated 2 months ago
• flatironinstitute / nemos
  NEural MOdelS, a statistical modeling framework for neuroscience.
  ☆106Updated this week
• cortex-lab / spikes
  cortex lab code for electrophysiology
  ☆84Updated last year
• catalystneuro / neuroconv
  Create NWB files by converting and combining neural data in proprietary formats and adding essential metadata.
  ☆64Updated this week
• VirtualBrainLab / Pinpoint
  Multi-probe trajectory planning in an intuitive 3D environment
  ☆56Updated 2 weeks ago
• simonarvin / braincoordinator
  Open-source stereotaxic coordinator
  ☆15Updated 2 years ago
• flatironinstitute / neurosift
  Browser-based NWB visualization and DANDI exploration
  ☆60Updated 2 weeks ago
• SpikeInterface / probeinterface_library
  Collection of probe description for probeinterface
  ☆16Updated last week
• DeNardoLab / BehaviorDEPOT
  Repository for BehaviorDEPOT pipeline app files and source code
  ☆38Updated last year
• ThomasAkam / Point_Grey_Bonsai_multi_camera_acquisition
  Configurable acquisition from multiple FLIR/Point Grey camera using Bonsai and Python to h264 compress the video on the GPU.
  ☆15Updated 6 months ago
• gloewing / photometry_FLMM
  Code for Functional Mixed Models for Fiber Photometry
  ☆13Updated 2 months ago
• buzsakilab / buzcode
  Code for internal lab sharing - polishing has started but is by no means complete
  ☆129Updated last year
• PeyracheLab / pynacollada
  pynapple collaborative data analysis (high level python scripts)
  ☆37Updated last year
• djoshea / neuropixel-utils
  Utilities for managing Neuropixel datasets and Kilosort results
  ☆49Updated 4 months ago