Jupyter notebook templates for processing and analyzing neuroscience data.
☆17Jun 2, 2026Updated last month
Alternatives and similar repositories for neuro-notebook-templates
Users that are interested in neuro-notebook-templates are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- FINDR: Flow-field Inference from Neural Data using deep Recurrent networks☆22Jul 9, 2026Updated 2 weeks ago
- SING: SDE Inference via Natural Gradients☆40May 5, 2026Updated 2 months ago
- IBL AI Agent helps you use a coding agent such as OpenAI Codex to analyze International Brain Laboratory (IBL) data.☆41Updated this week
- Richard @rdgao & Michael @michaeldeistler: using neural network-based regression and density estimation for Generalized Bayesian Inferenc…☆11Dec 19, 2025Updated 7 months ago
- This repository contains the scripts for reproducing the results presented in Costa AC, Ahamed T, Jordan D, Stephens GJ (2023) "A Markov…☆11Sep 25, 2025Updated 10 months ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Modeling animal vocalizations with variational autoencoders☆27Mar 2, 2024Updated 2 years ago
- Region Of Interest Classification and Tracking☆37Updated this week
- Python code implementing the ZETA-test☆28Jun 4, 2026Updated last month
- LISBET Is a Social BEhavior Transformer (LISBET)☆12Updated this week
- A Lightning app for animal pose estimation.☆26Jan 15, 2026Updated 6 months ago
- A multi-species, multi-ephys format histology processing and probe alignment pipeline☆13Mar 20, 2024Updated 2 years ago
- A mouse brain histology tool for neuroscientists.☆13Feb 16, 2026Updated 5 months ago
- code accompanying Pellegrino*, Stein*, & Cayco-Gajic (2023).☆14Oct 7, 2024Updated last year
- Feeding Experimentation Device version 3☆34Mar 25, 2026Updated 4 months ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- A package for causal inference and statistical modeling in brain time series☆56Jun 8, 2025Updated last year
- MEA-ToolBox is a standalone application that allows users to analyze voltage data recorded from multielectrode arrays.☆21Nov 9, 2022Updated 3 years ago
- Emergent property inference.☆11Jul 6, 2023Updated 3 years ago
- UltraMegaSort2000 - Spike sorting and quality metrics for extracellular spike data☆13Aug 20, 2014Updated 11 years ago
- A program for viewing and analyzing electrophysiological data☆60Jul 14, 2026Updated 2 weeks ago
- Code for Functional Mixed Models for Fiber Photometry☆19Jul 30, 2025Updated 11 months ago
- Deep Audio Segmenter, unsupervised☆10Feb 20, 2026Updated 5 months ago
- Fast optimisation of tuning curves by iterative refitting and decoding☆17Jul 21, 2026Updated last week
- This repository contains code for morphology-free analysis of functional fluorescence microscopy. The focal algorithm, Graph-Filtered Ti…☆16Nov 1, 2023Updated 2 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Robust, accurate, and unbiased quantification of neurons and dendritic spines.☆15May 6, 2026Updated 2 months ago
- Nice and powerful weather widget for Übersicht☆13Feb 22, 2021Updated 5 years ago
- 粵語/廣東話參考資料 Reference Materials for Yue / Cantonese☆15Dec 12, 2025Updated 7 months ago
- Closed-loop feedback optogenetic system☆10Apr 5, 2022Updated 4 years ago
- Extracting neuronal functional network dynamics via adaptive Granger causality analysis☆19Mar 29, 2018Updated 8 years ago
- CodeOcean capsule for full electrophysiology analysis pipeline using Kilosort2.5 via SpikeInterface.☆14Feb 7, 2024Updated 2 years ago
- A web platform for analyzing neuroimaging data.☆14Oct 17, 2023Updated 2 years ago
- Codebase for Cross-Spectral Factor Analysis (Gallagher et al., 2017)☆15Jan 18, 2021Updated 5 years ago
- Python package to handle probe layout, geometry and wiring to device.☆83Updated this week
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- UnitRefine is a machine-learning toolbox that simplifies spike sorting curation by reducing manual curation.☆80May 15, 2026Updated 2 months ago
- Structure Index code repository☆18Jun 13, 2025Updated last year
- Repository of jupyter notebooks for Psyc63 Experimental Study of Behavior at Dartmouth College☆13Mar 27, 2019Updated 7 years ago
- MoSeq2 Jupyter Notebook platform used to run all of the MoSeq2 tools in a GUI.☆42Feb 18, 2026Updated 5 months ago
- An active learning platform for expert-guided, data efficient discovery of behavior.☆76Jun 11, 2025Updated last year
- Calcium imaging inter-session alignment☆17Jun 8, 2026Updated last month
- Conditional Linear Dynamical Systems☆17Oct 7, 2025Updated 9 months ago