☆21Jan 13, 2026Updated 6 months ago
Alternatives and similar repositories for E2VD
Users that are interested in E2VD are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆59Sep 12, 2025Updated 10 months ago
- ☆23Jun 24, 2022Updated 4 years ago
- ☆11Mar 29, 2025Updated last year
- detect temperate phage (active prophage) in assembled bacterial genome sequences☆15Feb 10, 2022Updated 4 years ago
- Trying to train LoRAs for ESM-2☆13Aug 6, 2023Updated 2 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Inferring spatiotemporal dynamics of H5N1 influenza from sequence data☆10Sep 6, 2013Updated 12 years ago
- Scripts for building the ARTIC lab-on-an-SSD☆11Sep 9, 2020Updated 5 years ago
- A Snakefile to parallelize bwa.☆13Oct 25, 2013Updated 12 years ago
- A powerful Perl module for simulating the genome digestions by restriction enzymes☆14Sep 10, 2024Updated last year
- Motif Transformers for Predicting Protein-Protein Interactions Between a Novel Virus and Humans☆10Dec 4, 2024Updated last year
- Posterior Analysis of Coalescent Trees☆14Aug 6, 2015Updated 10 years ago
- 16S rRNA marker gene upstream and dowstream analysis tutorial for the UCT Hex cluster.☆12Jan 15, 2021Updated 5 years ago
- Inference of putative transmission phylogenetic clusters☆12Oct 13, 2020Updated 5 years ago
- GraphSNP: Using graph approach to investigate outbreak cluster and transmission in a web browser☆13Oct 5, 2025Updated 9 months ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- ☆13Dec 14, 2023Updated 2 years ago
- TreeCmp: comparison of trees in polynomial time☆14Aug 25, 2025Updated 11 months ago
- ☆12Nov 15, 2018Updated 7 years ago
- Code to go along with a manuscript: Bunis, et. al., Cell Reports, 2021.☆12May 3, 2023Updated 3 years ago
- We present Envision, an accurate predictor of protein variant molecular effect, trained using large-scale experimental mutagenesis data. …☆20Jan 5, 2018Updated 8 years ago
- Correlograms☆18May 18, 2026Updated 2 months ago
- A unified cross-attention model for predicting antigen binding specificity to both HLA and TCR molecules☆15May 29, 2026Updated 2 months ago
- KDS software for Kinase Drug Selectivity☆10Jun 22, 2026Updated last month
- 深度学习500问,以问答形式对常用的概率知识、线性代数、机器学习、深度学习、计算机视觉等热点问题进行阐述,以帮助自己及有需要的读者。 全书分为18个章节,50余万字。由于水平有限,书中不妥之处恳请广大读者批评指正。 未完待续............ 如有意合作,联系sc…☆12Sep 14, 2019Updated 6 years ago
- Open source password manager - Proton Pass • AdSecurely store, share, and autofill your credentials with Proton Pass, the end-to-end encrypted password manager trusted by millions.
- ☆13Apr 4, 2020Updated 6 years ago
- This is a read-only mirror of the CRAN R package repository. PopGenome — An Efficient Swiss Army Knife for Population Genomic Analyses …☆16Feb 3, 2020Updated 6 years ago
- Pretty, simple, optionally interactive plots for bioinformatics analysis pipelines☆14Mar 1, 2023Updated 3 years ago
- Systematic Cophylogeny Reconciliation Tool under Duplication-Transfer-Loss Model.☆16Sep 27, 2024Updated last year
- Prophage Tracer: precisely tracing prophages in prokaryotic genomes using overlapping split-read alignment☆25Oct 16, 2024Updated last year
- R package for constructing geodesic buffers using metric radii☆16May 29, 2024Updated 2 years ago
- fast sequence evolution simulation for SARS-CoV-2 and similar☆24Apr 11, 2025Updated last year
- Code for paired TCR data analysis from TIRTL-seq experiments☆13Nov 24, 2025Updated 8 months ago
- RNAseq analysis with Hisat2, stringtie, and ballgown☆17Aug 9, 2019Updated 6 years ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- Pipelines to do MinION sequencing of Zika virus☆15Jul 25, 2019Updated 7 years ago
- ☆15Jun 24, 2017Updated 9 years ago
- scripts for parsing PDB, fasta, and GO☆16Oct 20, 2021Updated 4 years ago
- 16S pipeline using qiime2 created with snakemake☆12Jul 13, 2026Updated 2 weeks ago
- machine learning guided antigenic evolution prediction☆12Jun 19, 2023Updated 3 years ago
- ☆14Mar 8, 2021Updated 5 years ago
- ☆19Jul 7, 2026Updated 3 weeks ago