Cytoscape app that clusters a given network based on topology to find densely connected regions
☆11Jun 28, 2023Updated 2 years ago
Alternatives and similar repositories for MCODE
Users that are interested in MCODE are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Cytoscape interface to STRING and STITCH☆11May 9, 2025Updated last year
- Single-cell identity definition using random forest modelling and recursive feature elimination☆12Aug 15, 2020Updated 5 years ago
- MATLAB implementation of Gene Set Enrichment Analysis (GSEA) method for finding pathways which can show more complex relation between cha…☆10Sep 7, 2022Updated 3 years ago
- Scripts supporting identification of genomic features affecting survival time in cancer☆14Dec 6, 2018Updated 7 years ago
- GO-PCA: An Unsupervised Method to Explore Gene Expression Data Using Prior Knowledge☆14Sep 13, 2017Updated 8 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Feature selection problem is one of the most significant issues in data classification. The purpose of feature selection is selection of …☆10Jan 29, 2020Updated 6 years ago
- Study done with the dataset of the Parkinson’s Disease Digital Biomarker DREAM Challenge☆11Jan 9, 2018Updated 8 years ago
- OncoNetExplainer: Explainable Prediction of Cancer Types Based on Gene Expression Data☆11Feb 28, 2023Updated 3 years ago
- Axel tries to accelerate HTTP/FTP downloading process by using multiple connections for one file. It can use multiple mirrors for a downl…☆21Sep 26, 2021Updated 4 years ago
- A general-purpose, stochastic, biochemical reaction simulator for large reaction networks☆15May 12, 2026Updated last week
- Marker gene selection from scRNA-seq data☆16Sep 15, 2020Updated 5 years ago
- ☆17Dec 9, 2019Updated 6 years ago
- HiGCN: a hierarchical graph convolution network for representation learning of gene expression data☆14Jan 24, 2021Updated 5 years ago
- "DeepDiff: Deep-learning for predicting Differential gene expression from histone modifications", Bioinformatics, Volume 34, Issue 17,☆21Dec 10, 2019Updated 6 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- open source high throughput homogeneous liquid handler ( automated pipette )☆17Sep 20, 2011Updated 14 years ago
- Some sleuth walkthroughs to help you get started☆10Jul 26, 2018Updated 7 years ago
- Analysis and Interpretation of Bulk RNA-Seq Data using Bioconductor☆27May 12, 2026Updated last week
- Graphical Representation of Ancestral Sequence Predictions☆13Mar 6, 2023Updated 3 years ago
- Multilayer recursive feature elimination based on embedded genetic algorithm for cancer classification☆15Nov 25, 2018Updated 7 years ago
- It's just a personal record for studying how to analysis TCGA data(expression+mutation+methylation+CNV)☆20Dec 28, 2016Updated 9 years ago
- Create documentation with social cards☆19May 28, 2024Updated last year
- insilico Pathway Activation Network Decomposition Analysis (iPANDA) package. Owned by Insilico Medicine Inc. iPANDA is a pathway analysis…☆30Mar 1, 2017Updated 9 years ago
- Scripts & snippets☆14Apr 28, 2026Updated 3 weeks ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Finding palindromes in a dictionary with various programming languages☆11Nov 7, 2018Updated 7 years ago
- GEDFN: Graph-Embedded Deep Feedforward Network☆23Apr 23, 2019Updated 7 years ago
- Source code for "A novel methodology on distributed representations of proteins using their interacting ligands"☆27Feb 23, 2020Updated 6 years ago
- ☆14Nov 1, 2017Updated 8 years ago
- ☆12Jun 12, 2023Updated 2 years ago
- ☆36Mar 18, 2026Updated 2 months ago
- Support Vector Machine in Python☆23Jun 5, 2016Updated 9 years ago
- Screen interactions with AlphaFold Multimer☆14Mar 10, 2025Updated last year
- ☆56Apr 20, 2025Updated last year
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- CNN-SVR: A deep learning approach for predicting CRISPR/Cas9 guide RNA on-target activity☆24Apr 25, 2021Updated 5 years ago
- Wikipedia clean-as-hell CSS theme with dark mode☆11Jan 1, 2026Updated 4 months ago
- Deep Learning Based Tumor Type Classification Using Gene Expression Data☆27Sep 17, 2024Updated last year
- (Extremely) simple standalone symbolic algebra library in OCaml. (Mirrored from original site.)☆12Oct 6, 2011Updated 14 years ago
- ☆20Mar 21, 2021Updated 5 years ago
- Visual SPARQL query tool☆10Feb 26, 2016Updated 10 years ago
- C++ library for parsing several formats in bioinformatics☆10May 18, 2023Updated 3 years ago