Alternatives and similar repositories for OMOP-Queries:

Users that are interested in OMOP-Queries are comparing it to the libraries listed below

• OHDSI / Tutorial-CDM
  Training materials for Vocabulary & CDM Tutorial.
  ☆21Updated 5 years ago
• OHDSI / Perseus
  [under development] Tools for ETL into OMOP CDM and deployment of OHDSI toolstack
  ☆33Updated last year
• OHDSI / Tutorial-ETL
  Course materials for OHDSI ETL tutorial
  ☆45Updated 4 months ago
• OHDSI / Broadsea
  Broadsea deploys the core OHDSI technology stack (Atlas & R Hades), using cross-platform Docker container technology.
  ☆79Updated last month
• OHDSI / Themis
  Repository for OMOP CDM conventions as defined by THEMIS. These can be reference lists of concepts, pieces of standardized code for data …
  ☆28Updated 4 months ago
• OHDSI / ClinicalTrialsWGETL
  [under development] ETL materials to support proposal for CDM enhancements for clinical trial data
  ☆23Updated 3 years ago
• OHDSI / Athena
  Web application for distributing and browsing the Standardized Vocabularies for all instances of an OMOP CDM
  ☆60Updated 2 weeks ago
• OHDSI / OncologyWG
  Oncology Working Group Repository
  ☆56Updated last month
• dermatologist / pyomop
  Python package for managing OHDSI clinical data models. Includes support for LLM based plain text queries!
  ☆43Updated this week
• OHDSI / CohortDiagnostics
  An R package for performing various cohort diagnostics.
  ☆43Updated this week
• PEDSnet / Data-Quality-Analysis
  The PEDSnet Data Quality Assessment Toolkit (OMOP CDM)
  ☆24Updated 3 years ago
• OHDSI / ETL-LambdaBuilder
  CDM Builder leveraging AWS Lambda
  ☆16Updated this week
• NCTraCSIDSci / camp-fhir
  ☆25Updated last month
• OHDSI / ETL-CDMBuilder
  ETL-CDMBuilder is a repo containing a .NET Core application to perform ETL to OMOP CDM for multiple databases
  ☆50Updated last year
• OHDSI / FeatureExtraction
  An R package for generating features (covariates) for a cohort using data in the Common Data Model.
  ☆62Updated last week
• OHDSI / NLPTools
  [in development] Tools to support Natural Language Processing of freetext to create structured data elements for analysis
  ☆32Updated last year
• jbadger3 / inspectomop
  ☆14Updated last week
• OHDSI / ETL-Synthea
  A package supporting the conversion from Synthea CSV to OMOP CDM
  ☆104Updated 2 weeks ago
• OHDSI / ETL-CMS
  Workproducts to ETL CMS datasets into OMOP Common Data Model
  ☆100Updated 2 years ago
• CDMFORUM / CDM-GUIDANCE
  The PCORnet Common Data Model (CDM) Forum guidance repository contains materials intended to support implementation efforts by data partn…
  ☆30Updated 4 years ago
• BenGlicksberg / PatientExploreR
  Dynamic visualization of Electronic Health Record data in the OMOP framework
  ☆28Updated 3 years ago
• callahantiff / OMOP2OBO
  OMOP2OBO: A Python Library for mapping OMOP standardized clinical terminologies to Open Biomedical Ontologies
  ☆86Updated last year
• National-Clinical-Cohort-Collaborative / Data-Ingestion-and-Harmonization
  Data Ingestion and Harmonization
  ☆43Updated 2 years ago
• NUSCRIPT / OMOP_to_Graph
  Transform the OMOP model to graph model
  ☆21Updated 3 months ago
• OHDSI / PheValuator
  An R package for evaluating phenotype algorithms.
  ☆17Updated 5 months ago
• OHDSI / Eunomia
  An R package that facilitates access to a variety of OMOP CDM sample data sets.
  ☆43Updated 5 months ago
• OHDSI / StudyProtocolSandbox
  This repository is for developing study packages for OHDSI studies. Once completed, they can be moved to the StudyProtocols repository.
  ☆32Updated 3 years ago
• OHDSI / Radiology-CDM
  Pilot model and converter for integration of radiology data into OMOP-CDM
  ☆22Updated 5 years ago
• OHDSI / OHDSI-in-a-Box
  Virtual Machine containing SynPUF data in OMOP CDM, a RDBS including query client, WebAPI, ATLAS, R and Python.
  ☆55Updated 4 years ago
• SoftwareCountry / Perseus
  ☆28Updated last year