OHDSI / OMOP-Queries
☆24Updated 6 years ago
Related projects ⓘ
Alternatives and complementary repositories for OMOP-Queries
- Training materials for Vocabulary & CDM Tutorial.☆20Updated 5 years ago
- Oncology Working Group Repository☆56Updated 4 months ago
- Repository for OMOP CDM conventions as defined by THEMIS. These can be reference lists of concepts, pieces of standardized code for data …☆28Updated 2 weeks ago
- An R package for generating features (covariates) for a cohort using data in the Common Data Model.☆61Updated last month
- The PEDSnet Data Quality Assessment Toolkit (OMOP CDM)☆24Updated 3 years ago
- Course materials for OHDSI ETL tutorial☆45Updated 3 weeks ago
- Dynamic visualization of Electronic Health Record data in the OMOP framework☆27Updated 3 years ago
- An R package for evaluating phenotype algorithms.☆17Updated last month
- [under development] ETL materials to support proposal for CDM enhancements for clinical trial data☆21Updated 3 years ago
- Broadsea deploys the core OHDSI technology stack (Atlas & R Hades), using cross-platform Docker container technology.☆76Updated 6 months ago
- Web application for distributing and browsing the Standardized Vocabularies for all instances of an OMOP CDM☆59Updated last month
- An R package for performing various cohort diagnostics.☆41Updated 2 weeks ago
- This repository is for developing study packages for OHDSI studies. Once completed, they can be moved to the StudyProtocols repository.☆32Updated 3 years ago
- ☆25Updated 7 months ago
- The PCORnet Common Data Model (CDM) Forum guidance repository contains materials intended to support implementation efforts by data partn…☆30Updated 4 years ago
- ☆14Updated last month
- Data Ingestion and Harmonization☆42Updated last year
- ETL-CDMBuilder is a repo containing a .NET Core application to perform ETL to OMOP CDM for multiple databases☆50Updated last year
- [under development] Tools for ETL into OMOP CDM and deployment of OHDSI toolstack☆32Updated last year
- OMOP2OBO: A Python Library for mapping OMOP standardized clinical terminologies to Open Biomedical Ontologies☆84Updated last year
- The repository for code and documentation produced by the N3C Phenotype and Data Acquisition workstream☆60Updated 10 months ago
- Python package for managing OHDSI clinical data models. Includes support for LLM based plain text queries!☆38Updated this week
- A repository to store, organize and maintain the content of the OHDSI Phenotype library. OHDSI Forum post https://forums.ohdsi.org/t/ohds…☆41Updated last month
- Repository of OHDSI Collaborative Research Protocols☆37Updated last year
- [in development] Tools to support Natural Language Processing of freetext to create structured data elements for analysis☆32Updated 10 months ago
- A package supporting the conversion from Synthea CSV to OMOP CDM☆98Updated last month
- [Under development] Assessment of Pre-trained Observational Large Language-models in OHDSI (APOLLO)☆11Updated 5 months ago
- https://celehs.github.io/PheCAP/☆21Updated 3 years ago
- Workproducts to ETL CMS datasets into OMOP Common Data Model☆98Updated 2 years ago
- Repository for development of the genomic module of the CDM.☆19Updated 5 years ago