darwin-eu / CodelistGenerator
Identifying relevant concepts from the OMOP CDM vocabularies
☆13Updated 3 weeks ago
Alternatives and similar repositories for CodelistGenerator:
Users that are interested in CodelistGenerator are comparing it to the libraries listed below
- This is an R package that implements a library of standard queries that run against the OMOP-CDM.☆15Updated 8 months ago
- A pipe friendly way to interact with an OMOP Common Data Model☆12Updated this week
- An R package for evaluating phenotype algorithms.☆17Updated 4 months ago
- An R package for performing various cohort diagnostics.☆42Updated last month
- R interface to NLM RxNorm API to get drug names and class based on RxCUI☆26Updated 10 months ago
- Cohort definition Application Programming in R☆17Updated this week
- R package to easily interface with OMOP-formatted EHR data.☆35Updated 4 years ago
- R package: ICD-9 and ICD-10 code utility functions and datasets☆19Updated 9 years ago
- An R package for performing patient level prediction using deep learning in an observational database in the OMOP Common Data Model.☆12Updated this week
- Shiny apps in this repository will be automatically deployed to the OHDSI Shiny server.☆27Updated this week
- An R interface to the RxNorm API.☆13Updated 8 years ago
- ARCHIVED Essential tools and utility functions to facilitate the data processing pipeline, data cleaning and data analysing of clinical…☆55Updated 2 years ago
- An R package for generating features (covariates) for a cohort using data in the Common Data Model.☆62Updated 4 months ago
- A Shiny tool for performing manual review of electronic medical records☆24Updated last year
- Loads CSV records from file, and maps them to FHIR resources.☆15Updated 3 weeks ago
- Training materials for Vocabulary & CDM Tutorial.☆21Updated 5 years ago
- An R package for connecting to databases using JDBC.☆56Updated this week
- R package for cleaning anthropometric (height and weight) data from electronic health record systems.☆14Updated last month
- A tool for generating clinical notes using Synthea patient FHIR Bundles☆10Updated last year
- This repository is for developing study packages for OHDSI studies. Once completed, they can be moved to the StudyProtocols repository.☆32Updated 3 years ago
- [Under development] Assessment of Pre-trained Observational Large Language-models in OHDSI (APOLLO)☆14Updated 8 months ago
- Comorbidities calculator for R using ICD-9 and ICD-10 based scores☆21Updated 8 years ago
- A repository to store, organize and maintain the content of the OHDSI Phenotype library. OHDSI Forum post https://forums.ohdsi.org/t/ohds…☆42Updated 4 months ago
- An R package that facilitates access to a variety of OMOP CDM sample data sets.☆43Updated 5 months ago
- An R package for interfacing with a WebAPI instance☆10Updated 5 months ago
- An R package for performing new-user cohort studies in an observational database in the OMOP Common Data Model.☆82Updated last week
- Health Analytics Data-to-Evidence Suite (HADES): A collection of R packages for performing analytics against the Common Data Model.☆24Updated this week
- Jupyter Notebooks and other code for 4CE data visualizations.☆13Updated 2 years ago
- Cohort Generation for the OMOP Common Data Model☆12Updated 2 months ago
- A collaborative project to build R tools facilitating access to quantitative healthcare and public health data☆24Updated 10 years ago