darwin-eu / CodelistGeneratorLinks
Identifying relevant concepts from the OMOP CDM vocabularies
☆17Updated 6 months ago
Alternatives and similar repositories for CodelistGenerator
Users that are interested in CodelistGenerator are comparing it to the libraries listed below
Sorting:
- An R package for performing patient level prediction in an observational database in the OMOP Common Data Model.☆212Updated this week
- ☆12Updated last month
- An R package for performing various cohort diagnostics.☆47Updated 3 months ago
- An R package for generating features (covariates) for a cohort using data in the Common Data Model.☆70Updated 3 weeks ago
- Clinical Natural Language Processing using spaCy, scispacy, and medspacy☆100Updated last year
- Automated Characterization of Health Information at Large-scale Longitudinal Evidence Systems (ACHILLES) - descriptive statistics about a…☆143Updated 2 weeks ago
- An NLP framework for clinical phenotyping. Docker | Python | Solr | OMOP. http://claritynlp.readthedocs.io/en/latest/☆108Updated last year
- Tools for working with icd codes and comorbidities☆26Updated 4 years ago
- Mapping the MIMIC-III database to the OMOP schema☆143Updated last year
- [in development]☆39Updated 4 years ago
- Workproducts to ETL CMS datasets into OMOP Common Data Model☆101Updated 3 years ago
- This is an R package that implements a library of standard queries that run against the OMOP-CDM.☆18Updated last year
- A tool to help improve data quality standards in observational data science.☆169Updated last month
- An R package for performing new-user cohort studies in an observational database in the OMOP Common Data Model.☆87Updated this week
- The Book of OHDSI repository☆123Updated last year
- Usagi is an application to help create mappings between coding systems and the Vocabulary standard concepts.☆104Updated last year
- Main OMOPonFHIR Settings☆46Updated 3 years ago
- Python package for machine learning for healthcare using a OMOP common data model☆111Updated 2 years ago
- Mapping U.S. FDA National Drug Codes (NDC) to Drug Classes and Codes☆103Updated 3 weeks ago
- ARCHIVED Essential tools and utility functions to facilitate the data processing pipeline, data cleaning and data analysing of clinical…☆55Updated 3 years ago
- Web application for distributing and browsing the Standardized Vocabularies for all instances of an OMOP CDM☆72Updated 3 months ago
- An R package that facilitates access to a variety of OMOP CDM sample data sets.☆46Updated 6 months ago
- ☆29Updated 2 years ago
- ETL Tool for converting datasets to OMOP CDM☆34Updated 3 years ago
- The repository for code and documentation produced by the N3C Phenotype and Data Acquisition workstream☆64Updated 5 months ago
- Training materials for Vocabulary & CDM Tutorial.☆22Updated 6 years ago
- ☆98Updated 2 years ago
- ACT COVID Ontology☆15Updated 4 years ago
- [Under development] Assessment of Pre-trained Observational Large Language-models in OHDSI (APOLLO)☆14Updated last year
- Build process for the OHDSI Standardized Vocabularies. Currently not available as independent release.☆258Updated this week