Identifying relevant concepts from the OMOP CDM vocabularies
☆18Aug 1, 2026Updated 3 weeks ago
Alternatives and similar repositories for CodelistGenerator
Users that are interested in CodelistGenerator are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A pipe friendly way to interact with an OMOP Common Data Model☆17Updated this week
- omopcept : an R package to access OMOP conCEPTs (no cons!) and flexible tidyverse compatible R functions for querying and visualising.☆16Jul 1, 2025Updated last year
- ☆12Nov 14, 2025Updated 9 months ago
- A repository to store, organize and maintain the content of the OHDSI Phenotype library. OHDSI Forum post https://forums.ohdsi.org/t/ohds…☆60Apr 9, 2026Updated 4 months ago
- Cohort definition Application Programming in R☆21Aug 1, 2026Updated 3 weeks ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- An R package for performing various cohort diagnostics.☆53Updated this week
- Model Context Protocol Server for the Observational Medical Outcomes Partnership (OMOP) Common Data Model☆29Jan 12, 2026Updated 7 months ago
- Medication Extraction and Reconciliation Knowledge Instrument☆13Jun 17, 2026Updated 2 months ago
- Proof Of Concept - Open Patient Pathway Generator using and an agent based approach☆12Apr 4, 2023Updated 3 years ago
- Streamlined Data Mapping to OMOP☆24Updated this week
- A tiny Python based package which allows to compare two pdf files☆13Apr 6, 2025Updated last year
- R package to streamline use of the AllofUs researcher workbench☆19Aug 10, 2026Updated 2 weeks ago
- ETL engine to transform openEHR into OMOP. Loads OMOCL configuration files.☆17Mar 9, 2026Updated 5 months ago
- ☆14Apr 14, 2026Updated 4 months ago
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- Tool to identify concept in the OMOP Genomic vocabulary from VCF and other files as well as HGVS notations☆15May 6, 2024Updated 2 years ago
- Pilot model and converter for integration of radiology data into OMOP-CDM☆24Nov 1, 2019Updated 6 years ago
- Spring AI framework for Java that plans, executes, and improves itself — agents detect capability gaps at runtime and generate validated …☆20Jul 18, 2026Updated last month
- Discrete Event Simulation in RSimmer of Ambulance Job Cycle Times☆14Feb 5, 2024Updated 2 years ago
- Snow Owl Terminology Server. This version is no longer maintained. Please use the upstream version or the alternate Snowstorm Terminology…☆11Feb 11, 2020Updated 6 years ago
- ☆16Updated this week
- Basic entity linker for the SNOMED EL Challenge☆15Jan 22, 2024Updated 2 years ago
- Hebrew PHI identification and redaction toolkit☆21Mar 21, 2024Updated 2 years ago
- Not really a scraper, but uses the hidden API of www.colruyt.be in order to scrape their products.☆16Jan 23, 2022Updated 4 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- A Python library of pre- and post-processing tools for applying deep learning to whole-slide images☆22Jan 16, 2023Updated 3 years ago
- Data2Evidence is an end-to-end solution for management and analysis of OMOP data - https://data2evidence.org☆42Updated this week
- Simulate GWAS data from an arbitrary DAG☆12Aug 6, 2026Updated 3 weeks ago
- ☆15Dec 8, 2023Updated 2 years ago
- An R Interface to the SNOMED CT API <https://github.com/IHTSDO/snowstorm>☆12Dec 15, 2022Updated 3 years ago
- The PEDSnet Data Quality Assessment Toolkit (OMOP CDM)☆27Apr 16, 2021Updated 5 years ago
- ☆14Dec 7, 2018Updated 7 years ago
- Beginning of a textbook for shell skills for bioinformatics☆11Oct 7, 2025Updated 10 months ago
- 📊ggplot2 Extension to Visualize Two Variables Per Color Aesthetic through Color Space Projection☆30May 4, 2020Updated 6 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- An R package to analyze treatment patterns of a study population of interest☆21Jun 19, 2023Updated 3 years ago
- Repository for OMOP CDM conventions as defined by THEMIS. These can be reference lists of concepts, pieces of standardized code for data …☆32Aug 27, 2025Updated last year
- Using SimPy to create OB patient flow models☆29Feb 3, 2023Updated 3 years ago
- A Streamlit component to render ECharts5.☆18Jul 8, 2024Updated 2 years ago
- Efficient, Tidyverse-friendly wrapper for the Airtable API☆18Jun 23, 2025Updated last year
- A package supporting the conversion from Synthea CSV to OMOP CDM☆130Mar 23, 2026Updated 5 months ago
- A curated list of awesome MLOps tools☆17Sep 13, 2022Updated 3 years ago