caesarnine / mimic-iii-language-model
Attempts to create a state of the art language model on clinical and medical text data.
☆12Updated 6 years ago
Related projects ⓘ
Alternatives and complementary repositories for mimic-iii-language-model
- Negation detection NLP tool. If you use the code, please cite George Gkotsis, Sumithra Velupillai, Anika Oellrich, Harry Dean,…☆55Updated 7 years ago
- Clinical NLP workshop for ODSC☆39Updated 5 years ago
- ☆13Updated 5 years ago
- Implementation and demo of explainable coding of clinical notes with Hierarchical Label-wise Attention Networks (HLAN)☆58Updated 2 years ago
- A comprehensive NLP preprocessing package for clinical notes sentence boundary detection, tokenization☆29Updated 6 months ago
- Clinical Text Summarization with Syntax-Based Negation and Semantic Concept Identification☆22Updated 4 years ago
- Learning from Discharge Summaries to extract mentioned diagnoses using Hierarchical Attention Model☆34Updated 6 years ago
- ☆21Updated last year
- Medical Similarity Dataset creation from SNOMED☆27Updated 2 years ago
- Tokenization, sentence segmentation, POS tagging and dependency parsing for biomedical texts (BMC Bioinformatics 2019)☆33Updated 5 years ago
- Platform enabling Rapid Annotation for Clinical Entity Recognition☆50Updated 2 years ago
- A simple interface to inspect, improve and add concepts to biomedical NER+L -> MedCAT.☆72Updated this week
- Surfacing Semantic Data from Clinical Notes in Electronic Health Records for Tailored Care, Trial Recruitment and Clinical Research☆89Updated last year
- ☆38Updated 2 years ago
- UMLS Graph database for semantic queries☆19Updated last year
- Code for the old version of BioMedICUS, for the new version see the biomedicus3 repository.☆44Updated last year
- Extract annotated misspellings from MIMIC-III.☆12Updated 3 years ago
- ☆15Updated 4 years ago
- Automatic classification of medical patient discharge notes into standard disease labels, using deep learning models☆29Updated 5 years ago
- ICD-BERT: Multi-label Classification of ICD-10 Codes with BERT (CLEF 2019)☆73Updated last year
- Dataset containing 7,025 discharge summary notes from the MIMIC III dataset annotated for 7 SBDHs☆12Updated 2 years ago
- Automatically exported from code.google.com/p/negex☆36Updated 2 years ago
- Embedding Complexity In the Data Representation Instead of In the Model (arXiv:1802.04233)☆24Updated 6 years ago
- ☆16Updated 6 years ago
- Easily identify and label sentence intervals using various taggers.☆16Updated 7 years ago
- ☆51Updated 4 years ago
- Weak supervision methods for extracting real world evidence from EHRs☆33Updated 4 years ago
- A model for finding mentions of adverse drug reactions in Twitter posts☆33Updated 6 years ago
- A simple baseline for the MedNLI dataset☆21Updated 5 years ago
- a Python tool to extract and structure numeric lab test comparison statements from text☆22Updated last year