outcomesinsights / generalized_data_model
Outcomes Insights' Data Model for Clinical Research
☆18Updated last year
Alternatives and similar repositories for generalized_data_model:
Users that are interested in generalized_data_model are comparing it to the libraries listed below
- Resources and documentation for UK Biobank to OMOP CDM v5.3.1 conversion☆9Updated 4 years ago
- Repository for development of the genomic module of the CDM.☆20Updated 5 years ago
- Hephaestus - ETL and ML tools for OHDSI - OMOP CDM☆13Updated 2 years ago
- Collection of various biomedical data models in parseable formats.☆28Updated last month
- ☆27Updated 6 years ago
- Transform the OMOP model to graph model☆22Updated 3 months ago
- Dynamic visualization of Electronic Health Record data in the OMOP framework☆28Updated 3 years ago
- An R package that facilitates access to a variety of OMOP CDM sample data sets.☆43Updated 6 months ago
- A software toolkit for the interconversion of standard data models for phenotypic data☆12Updated this week
- ☆14Updated 2 weeks ago
- [under development] ETL materials to support proposal for CDM enhancements for clinical trial data☆23Updated 3 years ago
- The PEDSnet Data Quality Assessment Toolkit (OMOP CDM)☆24Updated 3 years ago
- Shiny apps in this repository will be automatically deployed to the OHDSI Shiny server.☆27Updated last month
- ☆25Updated last month
- Training materials for Vocabulary & CDM Tutorial.☆21Updated 5 years ago
- OHDSI Ananke - A Tool for Mapping Between OHDSI Concept Identifiers to Unified Medical Language System (UMLS) identifiers☆14Updated 4 years ago
- An R package for evaluating phenotype algorithms.☆17Updated 5 months ago
- An R package for generating features (covariates) for a cohort using data in the Common Data Model.☆62Updated this week
- R interface to NLM RxNorm API to get drug names and class based on RxCUI☆26Updated 11 months ago
- HDR UK Schemas☆12Updated last year
- HDR UK OSS Contributions☆23Updated 2 weeks ago
- R package for easy access, manipulation, and analysis of the Monarch Initiative or other KGX-formatted knowledge graphs.☆14Updated 3 weeks ago
- Map your disease and phenotype terms to the Open Targets platform ontology☆21Updated 4 months ago
- Python package for managing OHDSI clinical data models. Includes support for LLM based plain text queries!☆43Updated 2 weeks ago
- Pilot model and converter for integration of radiology data into OMOP-CDM☆22Updated 5 years ago
- Use R to generate a database containing the UK Biobank data schemas from http://biobank.ctsu.ox.ac.uk/crystal/schema.cgi☆20Updated 4 years ago
- The PCORnet Common Data Model (CDM) Forum guidance repository contains materials intended to support implementation efforts by data partn…☆30Updated 4 years ago
- Repository for OMOP CDM conventions as defined by THEMIS. These can be reference lists of concepts, pieces of standardized code for data …☆28Updated 4 months ago
- [in development] Tools to support Natural Language Processing of freetext to create structured data elements for analysis☆32Updated last year
- Jupyter Notebooks and other code for 4CE data visualizations.☆13Updated 2 years ago