This project contains command line tools to perform rigid, affine and non-linear registration of nifti or analyse images as well as utilities
☆177Nov 21, 2025Updated 4 months ago
Alternatives and similar repositories for niftyreg
Users that are interested in niftyreg are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- highest ranked algorithm of Learn2Reg requires little to no training and runs within seconds☆80Nov 17, 2025Updated 4 months ago
- Official elastix repository☆562Mar 20, 2026Updated last week
- Unsupervised Learning for Image Registration☆2,679Feb 14, 2026Updated last month
- ☆32Mar 8, 2022Updated 4 years ago
- new and more efficient version for 3D discrete deformable registration, reaching the highest accuracy in several benchmarks☆127Sep 9, 2025Updated 6 months ago
- NordVPN Special Discount Offer • AdSave on top-rated NordVPN 1 or 2-year plans with secure browsing, privacy protection, and support for for all major platforms.
- Contrast-agnostic segmentation of MRI scans☆542Jul 17, 2024Updated last year
- Advanced Normalization Tools (ANTs)☆1,446Updated this week
- Neuroimaging in PyTorch☆100Updated this week
- Very fast greedy diffeomorphic registration code☆85Feb 12, 2026Updated last month
- an image registration/augmentation/segmentation package☆175Jan 8, 2023Updated 3 years ago
- Medical image registration using deep learning☆616Dec 15, 2022Updated 3 years ago
- A fast medical imaging analysis library in Python with algorithms for registration, segmentation, and more.☆846Mar 11, 2026Updated 2 weeks ago
- Large Deformation Diffeomorphic Image Registration with Laplacian Pyramid Networks☆141Jul 20, 2023Updated 2 years ago
- Image Registration☆295Nov 14, 2019Updated 6 years ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- Mirror of NifTK on cmiclab, providing 3 main GUIs and about 150+ command line apps.☆23Jul 27, 2019Updated 6 years ago
- Efficient dense deformable image registration☆29Jun 28, 2023Updated 2 years ago
- Multi-lingual medical image registration library☆537Jun 15, 2023Updated 2 years ago
- uniGradICON: A Foundation Model for Medical Image Registration (MICCAI 2024)☆212Mar 9, 2026Updated 2 weeks ago
- The accompanying code of "Accelerating B-spline Interpolation on GPUs: Application to Medical Image Registration"☆14Apr 11, 2020Updated 5 years ago
- One Shot Deformable Medical Image Registration☆41May 8, 2020Updated 5 years ago
- Conditional Deformable Image Registration with Convolutional Neural Network☆87May 21, 2024Updated last year
- Image registration laboratory for 2D and 3D image data☆430Oct 8, 2020Updated 5 years ago
- egs_brachy is an application for doing Monte Carlo brachytherapy simulations based on EGSnrc/egs++.☆24Jan 10, 2025Updated last year
- NordVPN Threat Protection Pro™ • AdTake your cybersecurity to the next level. Block phishing, malware, trackers, and ads. Lightweight app that works with all browsers.
- Code for ISBI 2024 paper "Fully Differentiable Correlation-driven 2D/3D Registration for X-Ray to CT Image Fusion"☆10Aug 26, 2024Updated last year
- Image registration using pytorch☆185Jul 25, 2024Updated last year
- Dataset of CT image pairs with landmarks for deformable image registration (DIR) quality assurance.☆14Jul 31, 2024Updated last year
- Inverse-Consistent Deep Networks for Unsupervised Deformable Image Registration☆56Dec 8, 2020Updated 5 years ago
- An ITK Python interface to elastix, a toolbox for rigid and nonrigid registration of images☆268Updated this week
- Multi Atlas Segmentation and Morphometric analysis toolkit (MASMAT) for mouse brain MRI☆41Nov 28, 2025Updated 4 months ago
- ☆26Dec 1, 2025Updated 3 months ago
- A toolbox for quantitative MRI and in vivo histology using MRI (hMRI)☆78Mar 16, 2026Updated last week
- Structural MRI PREProcessing (sMRIPrep) workflows for NIPreps (NeuroImaging PREProcessing tools)☆163Updated this week
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting with the flexibility to host WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Cloudways by DigitalOcean.
- ☆10Mar 1, 2021Updated 5 years ago
- A library for performing image registration using deep learning, regularized by inverse consistency☆58Mar 23, 2026Updated last week
- Tool for robust segmentation of >100 important anatomical structures in CT and MR images☆2,548Mar 20, 2026Updated last week
- Multi-modal Image Registration And Connectivity anaLysis☆48Mar 9, 2026Updated 3 weeks ago
- Tools to automate simple manipulations and measurements of medical images and segmentations in nifti format.☆23May 19, 2025Updated 10 months ago
- A 2D-3D histological brain slice registration application for mouse, rat, zebrafish brains.☆39Nov 24, 2023Updated 2 years ago
- Official implementation of Recurrence with Correlation Network for Medical Image Registration☆10Mar 4, 2026Updated 3 weeks ago