LucaProt: A novel deep learning framework that incorporates protein amino acid sequence and structural information to predict protein function.
☆31Sep 26, 2024Updated last year
Alternatives and similar repositories for LucaProt
Users that are interested in LucaProt are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- KDD '20: Proceedings of the 26th ACM SIGKDD International Conference on Knowledge Discovery & Data Mining: Attention and Memory-Augmente…☆29May 10, 2024Updated last year
- The project of the downstream tasks based on LucaOne's Embedding.☆74Mar 19, 2026Updated 3 weeks ago
- LucaOne’s representational inference code. Use this project for embedding inference.☆67Mar 18, 2026Updated 3 weeks ago
- We developed a dual-channel model named LucaPCycle, based on the raw sequence and protein language large models, to predict whether a pro…☆34Feb 1, 2026Updated 2 months ago
- The resources of LucaOne, including: the model code, training scripts, embedding inference code, and trained checkpoints.☆358Mar 18, 2026Updated 3 weeks ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click and start building anything your business needs.
- LucaVirus: Modeling the Evolutionary and Functional Landscape of Viruses with a Unified Genome-Protein Language Model☆65Mar 18, 2026Updated 3 weeks ago
- The project of the downstream tasks based on LucaVirus.☆35Dec 23, 2025Updated 3 months ago
- LucaProt: A novel deep learning framework that incorporates protein amino acid sequence and structural information to predict protein fun…☆223Jan 29, 2026Updated 2 months ago
- Official release of Genos models.☆23Jan 30, 2026Updated 2 months ago
- A fork of Autodock Vina for DeltaVina scoring function☆10Nov 7, 2016Updated 9 years ago
- A Python Library to interact with the Cell Collective API v2☆12Dec 8, 2022Updated 3 years ago
- Data Standards Hackathon for NGS based typing.☆14Feb 2, 2026Updated 2 months ago
- CV and NLP learning notebooks☆18May 10, 2019Updated 6 years ago
- VETA - A simple tool do evaluate variant predictors☆11Jun 17, 2024Updated last year
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- MeGAMerge (A tool to merge assembled contigs, long reads from metagenomic sequencing runs)☆14Dec 7, 2016Updated 9 years ago
- ☆11Jun 29, 2023Updated 2 years ago
- Simulating paired-end short sequencing reads from circular and linear genomes☆15May 14, 2021Updated 4 years ago
- Ratio of the interferon-γ signature to the immunosuppression signature predicts anti-PD-1 therapy response in melanoma☆13Jun 4, 2023Updated 2 years ago
- Course Materials for EN.601.452 / AS.020.415 Computational Biomedical Research & Advanced Biomedical Research☆14Nov 29, 2021Updated 4 years ago
- Extracts contigs harbouring a target gene / sequence from assemblies and aligns the contigs around the target sequence☆13May 15, 2018Updated 7 years ago
- Strip reads from Oxford Nanopore FAST5 files if they meet certain criteria☆14Jul 29, 2021Updated 4 years ago
- ☆13Jun 15, 2022Updated 3 years ago
- ORFFinder in Python☆15Aug 24, 2024Updated last year
- NordVPN Special Discount Offer • AdSave on top-rated NordVPN 1 or 2-year plans with secure browsing, privacy protection, and support for for all major platforms.
- DS-GA 1003: Machine Learning and Computational Statistics, Spring 2016☆16Jan 25, 2017Updated 9 years ago
- Amplicon Sequencing Analysis Pipeline☆19Sep 12, 2025Updated 6 months ago
- 🔥🐦🔥PHoeNIx: a platform agnostic pipeline for healthcare-associated and antimicrobial resistant pathogens☆102Updated this week
- Compute a pairwise SNP distance matrix from one or two alignment(s)☆26Sep 12, 2024Updated last year
- Actual csl file for MDPI reference in Zotero repository doesn't use DOI. This is an alternative .csl archive for MDPI format with DOI det…☆22Jan 10, 2023Updated 3 years ago
- ☆20Jan 23, 2019Updated 7 years ago
- VGEA (Viral Genomes Easily Analyzed) is a pipeline for analysis of RNA virus next-generation sequencing data.☆20Sep 12, 2021Updated 4 years ago
- BioInformatics Agent (BIA): Unleashing the Power of Large Language Models to Reshape Bioinformatics Workflow☆42Aug 21, 2024Updated last year
- CCL2022 领域问答库构建测评☆20Oct 31, 2022Updated 3 years ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- This GCI/VCI 1.0 platform has now been retired, and replaced with our new 2.0 platform:☆25Sep 16, 2022Updated 3 years ago
- A tutorial about Machine Learning Interpretability☆17Apr 20, 2019Updated 6 years ago
- RCandy: an R package for visualising homologous recombination events in bacterial genomes☆25Jun 17, 2022Updated 3 years ago
- attention mechanism in keras, like Dense and RNN...☆20May 11, 2018Updated 7 years ago
- ☆33Feb 21, 2022Updated 4 years ago
- Reconstruction algorithms for Python☆26Oct 23, 2024Updated last year
- ☆14Nov 11, 2025Updated 4 months ago