A new module for Megatron-LM training to enhance motif memory in Genomic
☆18Feb 2, 2026Updated 7 months ago
Alternatives and similar repositories for Gengram
Users that are interested in Gengram are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A Genomic Foundation Model☆181Apr 16, 2026Updated 5 months ago
- Official release of Gengram models.☆50Mar 17, 2026Updated 6 months ago
- HydraRNA is a full-length RNA language model.☆18Dec 15, 2025Updated 9 months ago
- BioInformatics Agent (BIA): Unleashing the Power of Large Language Models to Reshape Bioinformatics Workflow☆45Aug 21, 2024Updated 2 years ago
- Exploring how tokenization shapes the performance and generalization of single-cell foundation models.☆20Apr 16, 2026Updated 5 months ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- ☆16Feb 10, 2026Updated 7 months ago
- ☆11Apr 21, 2023Updated 3 years ago
- LucaProt: A novel deep learning framework that incorporates protein amino acid sequence and structural information to predict protein fun…☆32Sep 26, 2024Updated last year
- [ICML 2025] Fast and Low-Cost Genomic Foundation Models via Outlier Removal.☆19Jun 19, 2025Updated last year
- Official release of OneGenome-Rice models.☆27Jun 16, 2026Updated 3 months ago
- Simulate short-reads datasets using probabilistic models☆12Jun 1, 2013Updated 13 years ago
- profile basd Illumina pair-end Reads Simulator☆28Dec 18, 2023Updated 2 years ago
- We developed a dual-channel model named LucaPCycle, based on the raw sequence and protein language large models, to predict whether a pro…☆38Apr 28, 2026Updated 4 months ago
- Rare Disease Agent is an open-source genetic analysis system for rare disease diagnosis scenarios. OpenRare makes the invisible searchabl…☆30Sep 10, 2026Updated last week
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- VirID: An integrated platform for the discovery and characterization of RNA Viruses☆26Jan 8, 2026Updated 8 months ago
- ALignment Transformation EnviRonment☆12May 8, 2018Updated 8 years ago
- Implementation of AlphaGenome, Deepmind's updated genomic attention model☆15Feb 4, 2026Updated 7 months ago
- Dataloader for applying sequence models to personalized genomics☆29Updated this week
- Isoform-level spatial transcriptomics analysis☆18May 3, 2026Updated 4 months ago
- The project of the downstream tasks based on LucaOne's Embedding.☆78Apr 28, 2026Updated 4 months ago
- Visualize 3D ST data in Jupyter☆24Aug 21, 2026Updated 3 weeks ago
- Benchmarking scripts for Gaia☆17Apr 10, 2025Updated last year
- NeurIPS 2025☆16Feb 4, 2026Updated 7 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Highly sensitive pathogen detection☆12Oct 5, 2020Updated 5 years ago
- Polyidus provides a framework to catch chimeric DNA sequences with a tale of python☆10Jul 14, 2023Updated 3 years ago
- Automated construction of protein chimeras and their analysis.☆15Sep 29, 2023Updated 2 years ago
- ☆12Apr 4, 2023Updated 3 years ago
- ☆13Apr 23, 2025Updated last year
- Accurate Typing of Human Leukocyte Antigen (HLA) by Oxford Nanopore Sequencing☆17Jan 19, 2018Updated 8 years ago
- StereoMM is a graph fusion model that can integrate gene expression, histological images, and spatial location. And the information inter…☆39Dec 23, 2025Updated 8 months ago
- PathPiece tokenizer☆14Nov 10, 2024Updated last year
- Protein Origami via Genetic Fusions☆18Sep 19, 2022Updated 4 years ago
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- Detection of CNVs (deletion/duplication) in target panel based NGS data☆17May 23, 2023Updated 3 years ago
- Pneumococcal Capsular Typing tool for NGS data☆18Apr 6, 2021Updated 5 years ago
- Ximmer is a system for CNV calling on exome and targeted genomic sequencing☆19Jun 13, 2026Updated 3 months ago
- Cell-type Assignment and Module Extraction based on a heterogeneous graph neural network.☆10Oct 30, 2023Updated 2 years ago
- This is graphanalyzer.py, a script designed to automatically interpret the outputs generated by vConTACT2 when using the INPHARED databas…☆18Nov 29, 2023Updated 2 years ago
- CFSAN Shigella Typing Pipeline☆15Jun 11, 2026Updated 3 months ago
- Rosetta FunFolDes – a general framework for the computational design of functional proteins.☆20Apr 12, 2019Updated 7 years ago