LucaOne’s representational inference code. Use this project for embedding inference.
☆68Apr 28, 2026Updated 2 months ago
Alternatives and similar repositories for LucaOneApp
Users that are interested in LucaOneApp are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- The project of the downstream tasks based on LucaOne's Embedding.☆77Apr 28, 2026Updated 2 months ago
- KDD '20: Proceedings of the 26th ACM SIGKDD International Conference on Knowledge Discovery & Data Mining: Attention and Memory-Augmente…☆30May 10, 2024Updated 2 years ago
- LucaProt: A novel deep learning framework that incorporates protein amino acid sequence and structural information to predict protein fun…☆32Sep 26, 2024Updated last year
- The project of the downstream tasks based on LucaVirus.☆40Apr 28, 2026Updated 2 months ago
- The resources of LucaOne, including: the model code, training scripts, embedding inference code, and trained checkpoints.☆367May 25, 2026Updated 2 months ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- We developed a dual-channel model named LucaPCycle, based on the raw sequence and protein language large models, to predict whether a pro…☆37Apr 28, 2026Updated 2 months ago
- LucaVirus: Modeling the Evolutionary and Functional Landscape of Viruses with a Unified Genome-Protein Language Model☆74May 25, 2026Updated 2 months ago
- LucaProt: A novel deep learning framework that incorporates protein amino acid sequence and structural information to predict protein fun…☆227Jan 29, 2026Updated 5 months ago
- ☆16Feb 10, 2026Updated 5 months ago
- VirID: An integrated platform for the discovery and characterization of RNA Viruses☆26Jan 8, 2026Updated 6 months ago
- A new module for Megatron-LM training to enhance motif memory in Genomic☆18Feb 2, 2026Updated 5 months ago
- Repository for codes, analyses and visualizations for the CAMI II challenges☆14Sep 4, 2023Updated 2 years ago
- Taxallnomy is a balanced taxonomic tree database based on NCBI Taxonomy that provides taxonomic lineages according to the taxonomic ranks…☆13Apr 13, 2025Updated last year
- The data and standalone program of ESM-DBP☆10Jun 25, 2024Updated 2 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Code of a structure-enhanced RNA language model named ERNIE-RNA☆44May 3, 2026Updated 2 months ago
- Metagenomic Analysis in Real Time☆31Jul 7, 2026Updated 2 weeks ago
- Geometric deep learning of protein–DNA binding specificity☆80Mar 19, 2025Updated last year
- VETA - A simple tool do evaluate variant predictors☆11Jun 17, 2024Updated 2 years ago
- Official release of Genos models.☆26Jan 30, 2026Updated 5 months ago
- ☆12Feb 19, 2023Updated 3 years ago
- Keras implementation of DnCNN-S. Originaly as proposed by Zhang et al in the paper Beyond a Gaussian Denoiser: Residual Learning of Deep…☆10May 18, 2018Updated 8 years ago
- A selenium spider for GISAID☆11Apr 10, 2023Updated 3 years ago
- Ensemble binning strategies for combining the output of multiple binning methods.☆22Mar 11, 2023Updated 3 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- A Python Library to interact with the Cell Collective API v2☆12Dec 8, 2022Updated 3 years ago
- Hierarchical binned indexed data store for on-disk genomic data.☆13Jan 18, 2025Updated last year
- MeGAMerge (A tool to merge assembled contigs, long reads from metagenomic sequencing runs)☆14Dec 7, 2016Updated 9 years ago
- ☆37Mar 16, 2021Updated 5 years ago
- 塩基配列を高速に検索するウェブサービス☆18Mar 31, 2026Updated 3 months ago
- ☆23Jan 6, 2026Updated 6 months ago
- The demo for "Sawtooth Factorial Topic Embeddings Guided Gamma Belief Network" in ICML 2021☆10Aug 17, 2021Updated 4 years ago
- Viroid Nominator (VNom): reference free tool for nominating viroid-like de novo assembled contigs☆19Jan 21, 2024Updated 2 years ago
- Human-initiated, AI-powered knowledge graph for markdown documentation☆15Jan 30, 2026Updated 5 months ago
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- structRFM: A fully open structure-guided RNA foundation model for robust structural and functional inference☆36Jun 11, 2026Updated last month
- Conditional Variational Autoencoder for the prediction of site-specific recombinases selective for a specified target site☆12Jun 23, 2023Updated 3 years ago
- Course Materials for EN.601.452 / AS.020.415 Computational Biomedical Research & Advanced Biomedical Research☆15Nov 29, 2021Updated 4 years ago
- ☆21Jul 18, 2023Updated 3 years ago
- Ratio of the interferon-γ signature to the immunosuppression signature predicts anti-PD-1 therapy response in melanoma☆13Jun 4, 2023Updated 3 years ago
- Nucleic Acids Research 2024:RNA-MSM model is an unsupervised RNA language model based on multiple sequences that outputs both embedding a…☆71Jul 22, 2024Updated 2 years ago
- Protein-Protein Language Model with Novel Attention Mechanisms for Enhanced Inter-Protein Contact and Interaction Prediction☆62Jul 18, 2026Updated last week