LucaOne / LucaOneAppLinks
LucaOne’s representational inference code. Use this project for embedding inference.
☆52Updated this week
Alternatives and similar repositories for LucaOneApp
Users that are interested in LucaOneApp are comparing it to the libraries listed below
Sorting:
- The project of the downstream tasks based on LucaOne's Embedding.☆51Updated this week
- The resources of LucaOne, including: the model code, training scripts, embedding inference code, and trained checkpoints.☆291Updated this week
- KDD '20: Proceedings of the 26th ACM SIGKDD International Conference on Knowledge Discovery & Data Mining: Attention and Memory-Augmente…☆25Updated last year
- LucaProt: A novel deep learning framework that incorporates protein amino acid sequence and structural information to predict protein fun…☆27Updated 10 months ago
- LucaProt: A novel deep learning framework that incorporates protein amino acid sequence and structural information to predict protein fun…☆193Updated this week
- Multiple Protein Structure Alignment at Scale with FoldMason☆184Updated last week
- Nature Biotechnology: Ultra-fast, sensitive detection of protein remote homologs using deep dense retrieval☆115Updated 11 months ago
- Install alphafold on the local machine, get out of docker.☆102Updated 3 years ago
- snakemake pipeline for creating trees from sequence sets☆85Updated 2 months ago
- Multi-class signal peptide prediction and structure decoding model.☆90Updated 6 months ago
- ☆286Updated this week
- Bilingual Language Model for Protein Sequence and Structure☆262Updated 7 months ago
- CLEAN: a contrastive learning model for high-quality functional prediction of proteins☆278Updated 4 months ago
- Modified version of Alphafold to divide CPU part (MSA and template searching) and GPU part. This can accelerate Alphafold when predicting…☆171Updated last year
- Neural Networks for Protein Sequence Alignment☆124Updated 8 months ago
- ☆90Updated 10 months ago
- MMseqs2 app to run on your workstation or servers☆91Updated last week
- ☆21Updated 2 months ago
- GPro: a toolbox for Generative approaches in promoter design☆20Updated last year
- The LinearDesign mRNA design software.☆189Updated last year
- Deep learning and Bayesian approach applied to enzyme turnover number for the improvement of enzyme-constrained genome-scale metabolic mo…☆169Updated 2 years ago
- ☆77Updated last year
- ☆31Updated 3 years ago
- This is the offical codebase to reproduce and use EVOLVEpro, a model for in silico directed evolution of protein activities using few-sho…☆275Updated last month
- MSA(Multiple Sequence Alignment) visualization python package for sequence analysis☆139Updated 8 months ago
- ☆83Updated 2 years ago
- Universal Structure Alignment of Monomeric and Complex Structure of Nucleic Acids and Proteins☆154Updated 3 months ago
- AlphaFold2 non-docker setup☆362Updated last year
- ☆66Updated 9 months ago
- Genomic Pre-trained Network☆273Updated 3 weeks ago