☆19Mar 5, 2026Updated 7 months ago
Alternatives and similar repositories for vaxseer
Users that are interested in vaxseer are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆15Jul 4, 2025Updated last year
- Parse sequence files (GenBank, FASTA, SnapGene, SBOL) and accession IDs (NCBI, iGEM) to a common format☆20Mar 27, 2026Updated 7 months ago
- Scripts. config, and snakefiles for seasonal-flu nextstrain builds☆65Updated this week
- Spatial Phylogenetic Reconstruction of Evolutionary Dynamics 3☆19Jun 26, 2026Updated 4 months ago
- SARS-CoV-2 RBD antibody escape calculator☆13Nov 19, 2024Updated last year
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- ☆27Sep 19, 2026Updated last month
- Official repository for the paper "Learning from pre-pandemic data to forecast viral antibody escape"☆76Oct 11, 2023Updated 3 years ago
- ☆17May 12, 2023Updated 3 years ago
- A protein language model for learning the SARS-CoV-2 fitness landscape☆16Apr 22, 2025Updated last year
- ☆29Sep 29, 2026Updated last month
- AlphaBind code + model accompanying pre-print☆95Jul 24, 2025Updated last year
- Phyla: Towards a Foundation Model for Phylogenetic Inference☆29Nov 20, 2025Updated 11 months ago
- TN93 fast distance calculator☆21Oct 9, 2026Updated 3 weeks ago
- ☆11Aug 24, 2025Updated last year
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Time-resolved metagenomic sequencing of Lenski's long-term evolution experiment with Escherichia coli☆27Mar 11, 2019Updated 7 years ago
- Benchmarking se3-based generative models for protein structure design (⚡pytorch lightning backend)☆12Aug 1, 2025Updated last year
- Package: The R Code Optimizer☆83Nov 11, 2024Updated last year
- ☆16Sep 12, 2026Updated last month
- Tool repository for CAR-PNN☆14Oct 7, 2026Updated 3 weeks ago
- LucaProt: A novel deep learning framework that incorporates protein amino acid sequence and structural information to predict protein fun…☆32Sep 26, 2024Updated 2 years ago
- Code described in Harvey et al. 2026 (DOI: https://doi.org/10.1038/s41467-026-72093-5).☆11Oct 14, 2026Updated 2 weeks ago
- ☆33Jun 1, 2024Updated 2 years ago
- OPUS-Rota4: A Gradient-Based Protein Side-Chain Modeling Framework Assisted by Deep Learning-Based Predictors☆10Apr 14, 2022Updated 4 years ago
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- Python package for handling ModelCIF mmCIF and BinaryCIF files☆14Oct 7, 2026Updated 3 weeks ago
- KDD '20: Proceedings of the 26th ACM SIGKDD International Conference on Knowledge Discovery & Data Mining: Attention and Memory-Augmente…☆30May 10, 2024Updated 2 years ago
- ☆15Jul 28, 2025Updated last year
- NEFF Calculator and MSA File Converter☆16May 6, 2026Updated 5 months ago
- We developed a dual-channel model named LucaPCycle, based on the raw sequence and protein language large models, to predict whether a pro…☆38Apr 28, 2026Updated 6 months ago
- VESPA is a simple, yet powerful Single Amino Acid Variant (SAV) effect predictor based on embeddings of the Protein Language Model ProtT5…☆37Mar 4, 2024Updated 2 years ago
- Data and scripts for Zika virus tutorial☆10Jul 21, 2026Updated 3 months ago
- Flutrack platform gathers flu related tweets from the entire world, with searching tag, words that are influenza synonyms and flu symptom…☆13Apr 22, 2019Updated 7 years ago
- Nextflow pipeline for generation of phylogenetic trees to be visualized in Auspice.☆11Jan 6, 2026Updated 9 months ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- UFS simulation in python☆13Jun 24, 2018Updated 8 years ago
- 🐯 tigeR: Tumor Immunotherapy Gene Expression Data Analysis R package☆53Jan 21, 2026Updated 9 months ago
- A Nextflow pipeline for viral genomics (Influenza/RSV) supporting Illumina and Nanopore sequencing of clinical and wastewater samples.☆10Jun 9, 2026Updated 4 months ago
- Programmatically interact with the GISAID database.☆83Aug 5, 2025Updated last year
- Nested sampling packagin for BEAST☆12Aug 12, 2026Updated 2 months ago
- Open-source, commercially permissive implementation of the Germinal antibody design pipeline☆19Oct 17, 2026Updated 2 weeks ago
- Datamonkey - Run state-of-the-art statistical models through the comfort of your browser☆10Updated this week