UPDATE: All future changes will be pushed to https://github.com/HICAI-ZJU/PromptProtein
☆15Apr 23, 2023Updated 3 years ago
Alternatives and similar repositories for PromptProtein
Users that are interested in PromptProtein are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Code and Data for the paper: Multi-level Protein Structure Pre-training with Prompt Learning [ICLR 2023]☆33Aug 5, 2023Updated 2 years ago
- Sequence-based protein solubility prediction using multidimensional embedding☆13Apr 19, 2021Updated 5 years ago
- ☆13Oct 19, 2023Updated 2 years ago
- Protein-protein interacting site predictor using deep graph convolutional network☆11Jan 3, 2023Updated 3 years ago
- The source code of the paper "SHGNN: Structure-Aware Heterogeneous Graph Neural Network"☆14Dec 14, 2021Updated 4 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- SGPPI: structure-aware prediction of protein-protein interactions in rigorous conditions with graph convolutional network☆15Nov 17, 2022Updated 3 years ago
- Generative Pretrained Autoregressive Transformer Graph Neural Network applied to the Analysis and Discovery of Materials☆16Aug 9, 2023Updated 2 years ago
- Fork of matteofigliuzzi/bmDCA repository for Boltzmann-machine Direct Coupling Analysis (bmDCA).☆35Aug 23, 2020Updated 5 years ago
- ☆10Nov 30, 2022Updated 3 years ago
- ☆10Apr 11, 2022Updated 4 years ago
- ☆11Apr 11, 2023Updated 3 years ago
- Open-Protein is an open source pre-training platform that supports multiple protein pre-training models and downstream tasks.☆19Apr 14, 2023Updated 3 years ago
- GrafEq keygen by IDA☆15Dec 29, 2021Updated 4 years ago
- 豆瓣TOP250电影爬取，数据可视化实现，网页搭建☆13Nov 17, 2021Updated 4 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- the analysis script for PrismNet☆10May 17, 2020Updated 5 years ago
- Official implementation of IJCAI'23 paper "MolHF: A Hierarchical Normalizing Flow for Molecular Graph Generation"☆14Aug 27, 2023Updated 2 years ago
- Improving protein function prediction with synthetic feature samples created by generative adversarial networks☆22Oct 6, 2020Updated 5 years ago
- Code and data for the ACL2024 paper "InstructProtein: Aligning Human and Protein Language via Knowledge Instruction".☆23Aug 28, 2024Updated last year
- ☆13Mar 16, 2021Updated 5 years ago
- GearNet and Geometric Pretraining Methods for Protein Structure Representation Learning, ICLR'2023 (https://arxiv.org/abs/2203.06125)☆319Jun 13, 2025Updated 10 months ago
- ☆31Feb 22, 2022Updated 4 years ago
- DeepGraphGO: graph neural network for large-scale, multispecies protein function prediction☆35Jul 28, 2021Updated 4 years ago
- A Heterogeneous Graph Transformer (HGT)-based model for protein function prediction using biological knowledge graphs and protein languag…☆18Jan 27, 2026Updated 3 months ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- ☆15Feb 18, 2025Updated last year
- ☆14Jul 12, 2021Updated 4 years ago
- [Bioinformatics 2022] Cross-Modality and Self-Supervised Protein Embedding for Compound-Protein Affinity and Contact Prediction☆16Jun 6, 2024Updated last year
- ☆23Updated this week
- Official repository for discrete Walk-Jump Sampling (dWJS)☆60Jun 3, 2024Updated last year
- Official implementation of NeurIPS'24 paper "Bridge-IF: Learning Inverse Protein Folding with Markov Bridges"☆18Mar 16, 2025Updated last year
- ProtT5 (Transformer) embeddings used for residue wise disorder prediction in proteins☆11Mar 11, 2024Updated 2 years ago
- ☆42Jul 7, 2024Updated last year
- A network-based method for brain disease gene prediction by integrating brain connectome and molecular network☆10Jul 5, 2022Updated 3 years ago
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- catELMo: Context-Aware Amino Acid Embedding Advances Analysis of TCR-Epitope Interactions☆15Apr 10, 2025Updated last year
- ☆213Sep 24, 2024Updated last year
- Intrinsic-Extrinsic Convolution and Pooling for Learning on 3D Protein Structures☆49Jan 24, 2022Updated 4 years ago
- Neurally-derived Potts models for protein design, inspired by dTERMen☆14Aug 23, 2022Updated 3 years ago
- ☆15Nov 13, 2023Updated 2 years ago
- Official implementation of NeurIPS'23 paper "Sample-efficient Multi-objective Molecular Optimization with GFlowNets"☆20Dec 24, 2023Updated 2 years ago
- This script can clean up the disordered region in the AlphaFold DB structures to adapt it to the molecular docking, extract the sequence …☆15Apr 20, 2023Updated 3 years ago