Alternatives and similar repositories for covid19-forecast-hub-de

Users that are interested in covid19-forecast-hub-de are comparing it to the libraries listed below

• european-modelling-hubs / covid19-forecast-hub-europe_archive
  European Covid-19 Forecast Hub.
  ☆48Updated 7 months ago
• mobs-lab / mixing-patterns
  Inferring high-resolution human mixing patterns for disease modeling
  ☆45Updated 2 years ago
• kieshaprem / synthetic-contact-matrices
  Updates to the synthetic contact matrices
  ☆36Updated last year
• midas-network / covid19-scenario-modeling-hub_archive
  COVID-19 Scenario Modeling Hub
  ☆68Updated 3 weeks ago
• epiforecasts / socialmixr
  R package for deriving social mixing matrices from survey data.
  ☆38Updated this week
• cobeylab / Rt_estimation
  Code to test Rt estimates against synthetic data
  ☆17Updated 4 years ago
• HopkinsIDD / flepiMoP
  The Flexible Epidemic Modeling Pipeline
  ☆9Updated last week
• SABS-R3-Epidemiology / epiabm
  Epidemiological agent-based modelling packages in both python and C++. Published at: https://doi.org/10.5334/jors.449.
  ☆18Updated 3 weeks ago
• epiforecasts / EpiNow
  Estimate Realtime Case Counts and Time-varying Epidemiological Parameters
  ☆33Updated 2 years ago
• amanda-minter / abc_R
  ☆11Updated 4 years ago
• jgarciab / NetworkScience
  Summer School on Network Science (UU)
  ☆22Updated 10 months ago
• objornstad / epimdr2
  ☆20Updated 2 years ago
• epiforecasts / covidregionaldata
  An interface to subnational and national level COVID-19 data. For all countries supported, this includes a daily time-series of cases. Wh…
  ☆37Updated 2 years ago
• goldingn / neuts2efficacy
  modelling SARS-CoV-2 vaccine efficacy from antibody titres, and impact of waning and variants on transmission
  ☆17Updated last year
• wpgp / BEARmod
  Basic Epidemic, Activity, and Response COVID-19 model
  ☆31Updated 4 years ago
• mrc-ide / squire
  SEIR transmission model of COVID-19. Documentation at:
  ☆51Updated last year
• ImperialCollegeLondon / epidemia
  epidemia package
  ☆48Updated 2 years ago
• andy-iskauskas / hmer
  An R package for Bayes Linear emulation and history matching.
  ☆16Updated 3 months ago
• rosannaclairebarnard / covidm-mtd-Omi
  Data and code to support Barnard et al., Modelling the medium-term dynamics of SARS-CoV-2 transmission in England in the Omicron era, Nat…
  ☆12Updated 2 years ago
• epidemics / COVIDNPIs
  Data and code for COVID-19 NPI effectiveness estimation.
  ☆30Updated 4 years ago
• akira-endo / COVID19_backwardtracing
  Implication of overdispersed transmission of COVID-19 on the effectiveness of contact tracing
  ☆8Updated 4 years ago
• MrinankSharma / COVID19NPISecondWave
  ☆15Updated 3 years ago
• synthpops / synthpops
  Create synthetic populations for COVID-19 epidemic analyses.
  ☆47Updated 3 months ago
• reichlab / covidHubUtils
  Utility functions for the COVID-19 forecast hub
  ☆18Updated last year
• akira-endo / COVID19_clustersize
  Analysis of COVID-19 transmission using cluster size distribution
  ☆11Updated 2 years ago
• biouea / covidhm
  ☆23Updated 4 years ago
• kdeforche / epi-mcmc
  Scripts for estimating and visualizing epidemiological modeling of an epidemic (developed for COVID-19)
  ☆13Updated 4 years ago
• charlesm93 / disease_transmission_workflow
  Supplementary code for paper "Bayesian workflow for disease transmission model".
  ☆27Updated 4 years ago
• mrc-ide / COVID19_CFR_submission
  Repository for all scripts required to replicate the CFR analysis for paper submission.
  ☆71Updated 4 years ago
• epiforecasts / EpiNow2
  Estimate Realtime Case Counts and Time-varying Epidemiological Parameters
  ☆129Updated last week