Alternatives and similar repositories for covid19-forecast-hub-de

Users that are interested in covid19-forecast-hub-de are comparing it to the libraries listed below

• european-modelling-hubs / covid19-forecast-hub-europe_archive
  European Covid-19 Forecast Hub.
  ☆48Updated 8 months ago
• wpgp / BEARmod
  Basic Epidemic, Activity, and Response COVID-19 model
  ☆31Updated 5 years ago
• goldingn / neuts2efficacy
  modelling SARS-CoV-2 vaccine efficacy from antibody titres, and impact of waning and variants on transmission
  ☆17Updated last year
• kieshaprem / synthetic-contact-matrices
  Updates to the synthetic contact matrices
  ☆37Updated last year
• cobeylab / Rt_estimation
  Code to test Rt estimates against synthetic data
  ☆18Updated 4 years ago
• covid19br / nowcaster
  Repository to the R package nowcaster, nowcasting with INLA
  ☆21Updated last week
• ImperialCollegeLondon / epidemia
  epidemia package
  ☆48Updated 3 years ago
• epiforecasts / scoringutils
  Utilities for Scoring and Assessing Predictions
  ☆53Updated 2 weeks ago
• midas-network / covid19-scenario-modeling-hub_archive
  COVID-19 Scenario Modeling Hub
  ☆68Updated 2 months ago
• akira-endo / COVID19_backwardtracing
  Implication of overdispersed transmission of COVID-19 on the effectiveness of contact tracing
  ☆8Updated 4 years ago
• mobs-lab / mixing-patterns
  Inferring high-resolution human mixing patterns for disease modeling
  ☆46Updated 2 years ago
• mhoehle / STA427_SM4IDE
  Repo for the course Statistical Methods in Infectious Disease Epidemiology at UZH
  ☆19Updated 3 years ago
• SABS-R3-Epidemiology / epiabm
  Epidemiological agent-based modelling packages in both python and C++. Published at: https://doi.org/10.5334/jors.449.
  ☆18Updated 3 weeks ago
• epiforecasts / covidregionaldata
  An interface to subnational and national level COVID-19 data. For all countries supported, this includes a daily time-series of cases. Wh…
  ☆37Updated 2 years ago
• epiforecasts / socialmixr
  R package for deriving social mixing matrices from survey data.
  ☆38Updated 3 weeks ago
• akira-endo / COVID19_clustersize
  Analysis of COVID-19 transmission using cluster size distribution
  ☆11Updated 3 years ago
• mrc-ide / squire
  SEIR transmission model of COVID-19. Documentation at:
  ☆51Updated last year
• covid-19-Re / estimateR
  R package for estimation and monitoring of the effective reproduction number in a pathogen outbreak/epidemic
  ☆11Updated 10 months ago
• kbubar / vaccine_prioritization
  ☆17Updated 4 years ago
• biouea / covidhm
  ☆23Updated 4 years ago
• ryantibs / quantgen
  Tools for generalized quantile modeling
  ☆15Updated 2 years ago
• reichlab / covidHubUtils
  Utility functions for the COVID-19 forecast hub
  ☆18Updated last year
• kpzoo / EpiFilter
  Optimised estimates of reproduction numbers over time, which extract more information from an incidence curve than many conventional appr…
  ☆22Updated last year
• epiforecasts / EpiNow
  Estimate Realtime Case Counts and Time-varying Epidemiological Parameters
  ☆33Updated 2 years ago
• mrc-ide / individual
  R Package for individual based epidemiological models
  ☆30Updated 10 months ago
• andy-iskauskas / hmer
  An R package for Bayes Linear emulation and history matching.
  ☆16Updated 4 months ago
• gkonstantinoudis / ExcessDeathsCOVID
  Excess deaths due to COVID-19 pandemic in 2020
  ☆11Updated 3 years ago
• mrc-ide / sircovid
  ☆29Updated last month
• epiforecasts / inc2prev
  Estimate epidemiological quantities from repeated cross-sectional prevalence measurements
  ☆17Updated last year
• EpiModel / EpiModel-Gallery
  Gallery of Network-Based Epidemic Model Templates for EpiModel
  ☆55Updated 9 months ago