IliaZenkov / async-pubmed-scraperLinks
PubMed scraper for async search on a list of keywords and concurrent extraction of all found URLs, returning a DataFrame/CSV containing all article data (title, abstract, authors, affiliations, etc)
☆43Updated 4 years ago
Alternatives and similar repositories for async-pubmed-scraper
Users that are interested in async-pubmed-scraper are comparing it to the libraries listed below
Sorting:
- A Python package to download full article PDFs from OA publications☆48Updated 8 months ago
- Python toolkit for NCBI metadata (via eutils) and pubmed article text mining -- official primary repo.☆126Updated 2 weeks ago
- A resource of adverse drug effects extracted from FDA structured product labels☆82Updated 2 months ago
- Backend library for conversational AI in biomedicine☆179Updated 2 months ago
- Bioinformatics 2020: Graph Neural Networks for DNA Sequence Classification☆33Updated 4 years ago
- A collection of available Python tools for Proteomics analysis☆59Updated 6 years ago
- ☆19Updated 3 years ago
- a package for streamlined multidomain data integration and translation based on cross-modal autoencoders architectures☆29Updated 2 years ago
- Retrieve PubMed articles, text-mining annotations, or molecular data from >35 Entrez databases via easy to use Python package - built on …☆79Updated last year
- StarGazer is a tool designed for rapidly assessing drug repositioning opportunities. It combines multi-source, multi-omics data with a no…☆35Updated 2 years ago
- ☆11Updated 10 months ago
- Build PharMeBINet from different sources.☆19Updated 2 weeks ago
- Repository for mRNA Paper and CodonBERT publication.☆134Updated last year
- Code for 5UTR project☆25Updated 2 years ago
- A database of paths that represent the mechanism of action from a drug to a disease in an indication.☆65Updated 4 months ago
- De novo peptide sequencing with InstaNovo: Accurate, database-free peptide identification for large scale proteomics experiments☆98Updated last week
- Python Package for the downstream analysis of mass-spectrometry-based proteomics data☆73Updated last week
- Open-Source package for segmentation and analysis of gel electrophoresis images using machine learning. Both a python framework for trai…☆71Updated 2 months ago
- 🧪 🖥 Transparent exploration of machine learning for biomarker discovery from proteomics and omics data☆36Updated last year
- A unifying framework for biomedical research knowledge graphs☆264Updated 2 weeks ago
- Predicting siRNA activity with machine learning☆24Updated 6 years ago
- ☆46Updated 5 months ago
- KGWAS: novel genetics discovery enabled by massive functional genomics knowledge graph☆73Updated 6 months ago
- Using Transformer protein embeddings with a linear attention mechanism to make SOTA de-novo predictions for the subcellular location of p…☆67Updated 2 years ago
- ☆15Updated last week
- Python package that wraps around the ClinicalTrials.gov API☆56Updated last year
- ☆47Updated last year
- Batch download articles based on PMID (Pubmed ID)☆129Updated last year
- ☆29Updated 2 years ago
- Pipeline for assessing the tractability of potential targets (starting from Gene IDs)☆27Updated 7 months ago