Alternatives and similar repositories for async-pubmed-scraper

Users that are interested in async-pubmed-scraper are comparing it to the libraries listed below

• metapub / metapub
  Python toolkit for NCBI metadata (via eutils) and pubmed article text mining -- official primary repo.
  ☆122Updated last month
• ddomingof / PubMed2PDF
  A Python package to download full article PDFs from OA publications
  ☆46Updated 6 months ago
• biocypher / biochatter
  Backend library for conversational AI in biomedicine
  ☆169Updated last week
• krassowski / easy-entrez
  Retrieve PubMed articles, text-mining annotations, or molecular data from >35 Entrez databases via easy to use Python package - built on …
  ☆79Updated last year
• MannLabs / alphapeptstats
  Python Package for the downstream analysis of mass-spectrometry-based proteomics data
  ☆70Updated 2 weeks ago
• Roestlab / PythonProteomics
  A collection of available Python tools for Proteomics analysis
  ☆58Updated 6 years ago
• tatonetti-lab / onsides
  A resource of adverse drug effects extracted from FDA structured product labels
  ☆81Updated 3 weeks ago
• jvfe / pytrials
  Python package that wraps around the ClinicalTrials.gov API
  ☆56Updated last year
• ckoenigs / PharMeBINet
  Build PharMeBINet from different sources.
  ☆18Updated last week
• SuLab / DrugMechDB
  A database of paths that represent the mechanism of action from a drug to a disease in an indication.
  ☆65Updated 2 months ago
• MaayanLab / L1000toRNAseq
  ☆18Updated 2 years ago
• biocypher / biocypher
  A unifying framework for biomedical research knowledge graphs
  ☆258Updated last week
• MannLabs / alphapept
  A modular, python-based framework for mass spectrometry. Powered by nbdev.
  ☆176Updated last year
• iomega / spec2vec
  Word2Vec based similarity measure of mass spectrometry data.
  ☆70Updated 11 months ago
• djwooten / synergy
  Python library for calculting synergy of drug combinations using several drug synergy frameworks
  ☆36Updated 8 months ago
• Novartis / ChemBioMultimodalAutoencoders
  a package for streamlined multidomain data integration and translation based on cross-modal autoencoders architectures
  ☆29Updated 2 years ago
• chembl / tractability_pipeline_v2
  Pipeline for assessing the tractability of potential targets (starting from Gene IDs)
  ☆24Updated 5 months ago
• myinsilicom / iKraph
  ☆38Updated 3 months ago
• MannLabs / alphamap
  An open-source Python package for the visual annotation of proteomics data with sequence specific knowledge.
  ☆82Updated 4 months ago
• sambitmishra0628 / siRNA_activity_prediction
  Predicting siRNA activity with machine learning
  ☆24Updated 5 years ago
• bzhanglab / deep_learning_in_proteomics
  A list of tools on proteomics using deep learning
  ☆97Updated last year
• mims-harvard / PINNACLE
  Contextual AI models for single-cell protein biology
  ☆86Updated 5 months ago
• idekerlab / DrugCell
  A visible neural network model for drug response prediction
  ☆144Updated last year
• iit-Demokritos / drug_id_mapping
  Cross matching drugs from different databases ( Drugbank, STITCH, ChEMBL PubChem, UMLS, TTD, KEGG, ZINC ) and saving in a structured TSV …
  ☆29Updated last year
• lmsac / DeepDIA
  Using deep learning to generate in silico spectral libraries for data-independent acquisition analysis.
  ☆42Updated 2 years ago
• CMRI-ProCan / DeePathNet
  ☆11Updated 8 months ago
• MannLabs / ProteomicsVisualization
  This is a collection of minimal code to visualize various aspects of proteomics data.
  ☆79Updated 3 years ago
• biocypher / biochatter-light
  The light frontend for BioChatter, in pure Python
  ☆54Updated this week
• griquelme / tidyms
  TidyMS: Tools for working with MS data in untargeted metabolomics
  ☆55Updated last year
• yjdeng9 / DeepMSProfiler
  DeepMSProfiler, an innovative data analysis tool focused on liquid chromatography mass spectrometry (LC-MS) data.
  ☆27Updated 10 months ago