Alternatives and similar repositories for multixrank

Users that are interested in multixrank are comparing it to the libraries listed below

• mojaie / pygosemsim
  Gene ontology (GO) semantic similarity library for Python
  ☆24Updated 6 years ago
• menchelab / MultiOme
  Network-based project to explore gene connectivity through biological scales
  ☆23Updated 10 months ago
• snap-stanford / mambo
  ☆37Updated 7 years ago
• LPioL / MultiVERSE
  ☆20Updated 4 years ago
• alberto-valdeolivas / RWR-MH
  Random Walk with Restart on Multiplex and Heterogeneous Biological Networks
  ☆36Updated 5 years ago
• mims-harvard / crank
  Prioritizing network communities
  ☆30Updated 5 years ago
• IlyaLab / CombiningDependentPvaluesUsingEBM
  Python, R and Matlab implementation of Brown's Method to combine dependent P-values
  ☆25Updated 7 years ago
• rvinas / HYFA
  Hypergraph Factorisation
  ☆25Updated 9 months ago
• kckishan / GNE
  This repository contains the tensorflow implementation of "GNE: A deep learning framework for gene network inference by aggregating biolo…
  ☆32Updated 4 years ago
• hetio / hetnetpy
  Hetnets in Python (relocated from dhimmel/hetio)
  ☆98Updated 2 years ago
• tbonald / paris
  Hierarchical graph clustering
  ☆38Updated 7 years ago
• menicgiulia / NetMedPy
  ☆16Updated 2 months ago
• snap-stanford / multiscale-interactome
  ☆68Updated 2 years ago
• Case-esaC / iDrug
  ☆19Updated 5 years ago
• krishnanlab / PecanPy
  A fast, parallelized, memory efficient, and cache-optimized Python implementation of node2vec
  ☆168Updated 2 weeks ago
• krishnanlab / obnb
  A Python toolkit for setting up benchmarking dataset using biomedical networks
  ☆22Updated last week
• zeochoy / tcga-embedding
  using shallow neural network layer (embedding) to infer gene-gene/sample relationship from gene expression data
  ☆21Updated 6 years ago
• AstraZeneca / skywalkR
  code for Gogleva et al manuscript
  ☆45Updated 2 years ago
• idekerlab / Network_Evaluation_Tools
  Python 2.7 package with examples for evaluating a network's ability to group a given node set in network proximity.
  ☆32Updated 2 years ago
• emreg00 / toolbox
  Toolbox - generic utilities for data processing (e.g., parsing, proximity, guild scoring, etc...)
  ☆111Updated 3 years ago
• mims-harvard / ohmnet
  OhmNet: Representation learning in multi-layer graphs
  ☆83Updated 5 years ago
• mims-harvard / pathways
  Disease pathways in the human interactome
  ☆23Updated 7 years ago
• SkBlaz / py3plex
  Py3plex - A multilayer complex network visualization and analysis library in python3
  ☆165Updated last week
• bowang-lab / BIONIC
  Biological Network Integration using Convolutions
  ☆62Updated last year
• uhlerlab / covid19_repurposing
  ☆13Updated 4 years ago
• mims-harvard / SHEPHERD
  SHEPHERD: Few shot learning for phenotype-driven diagnosis of patients with rare genetic diseases
  ☆70Updated last month
• rvinas / adversarial-gene-expression
  Adversarial generation of gene expression data using Generative Adversarial Networks
  ☆27Updated 3 years ago
• GuyAllard / markov_clustering
  markov clustering in python
  ☆174Updated 3 years ago
• mila-iqia / gene-graph-conv
  Towards Gene Expression Convolutions using Gene Interaction Graphs
  ☆75Updated 3 years ago
• kylessmith / dynamicTreeCut
  Python translation of the hybrid dynamicTreeCut method as created by Peter Langfelder and Bin Zhang.
  ☆40Updated 3 years ago